Strain Fitness in Marinobacter adhaerens HP15 around HP15_2843

Experiment: m.b. Zinc 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2842 and HP15_2843 are separated by 430 nucleotidesHP15_2843 and HP15_2844 are separated by 121 nucleotidesHP15_2844 and HP15_2845 are separated by 30 nucleotides HP15_2842: HP15_2842 - transcriptional regulatory protein, at 2,984,509 to 2,985,225 _2842 HP15_2843: HP15_2843 - YHS domain protein, at 2,985,656 to 2,986,099 _2843 HP15_2844: HP15_2844 - hypothetical protein, at 2,986,221 to 2,986,388 _2844 HP15_2845: HP15_2845 - conserved hypothetical protein, at 2,986,419 to 2,987,099 _2845 Position (kb) 2985 2986 2987Strain fitness (log2 ratio) -2 -1 0 1 2at 2984.678 kb on + strand, within HP15_2842at 2984.686 kb on - strand, within HP15_2842at 2985.017 kb on - strand, within HP15_2842at 2985.025 kb on + strand, within HP15_2842at 2985.033 kb on - strand, within HP15_2842at 2985.033 kb on - strand, within HP15_2842at 2985.286 kb on - strandat 2985.288 kb on - strandat 2985.350 kb on + strandat 2985.364 kb on + strandat 2985.364 kb on + strandat 2985.389 kb on - strandat 2985.425 kb on + strandat 2985.534 kb on - strandat 2985.539 kb on - strandat 2985.593 kb on + strandat 2985.609 kb on + strandat 2985.714 kb on - strand, within HP15_2843at 2985.750 kb on + strand, within HP15_2843at 2985.753 kb on - strand, within HP15_2843at 2985.825 kb on + strand, within HP15_2843at 2985.833 kb on - strand, within HP15_2843at 2985.843 kb on - strand, within HP15_2843at 2985.847 kb on - strand, within HP15_2843at 2985.968 kb on + strand, within HP15_2843at 2985.976 kb on - strand, within HP15_2843at 2985.976 kb on - strand, within HP15_2843at 2985.981 kb on - strand, within HP15_2843at 2985.981 kb on - strand, within HP15_2843at 2985.981 kb on - strand, within HP15_2843at 2986.030 kb on - strand, within HP15_2843at 2986.072 kb on + strandat 2986.096 kb on - strandat 2986.214 kb on - strandat 2986.214 kb on - strandat 2986.279 kb on - strand, within HP15_2844at 2986.321 kb on + strand, within HP15_2844at 2986.562 kb on + strand, within HP15_2845at 2986.697 kb on + strand, within HP15_2845at 2986.783 kb on + strand, within HP15_2845at 2986.924 kb on - strand, within HP15_2845at 2986.976 kb on + strand, within HP15_2845at 2987.044 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM
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2,984,678 + HP15_2842 0.24 +0.2
2,984,686 - HP15_2842 0.25 -0.5
2,985,017 - HP15_2842 0.71 -0.6
2,985,025 + HP15_2842 0.72 +0.1
2,985,033 - HP15_2842 0.73 +0.4
2,985,033 - HP15_2842 0.73 +0.1
2,985,286 - -1.6
2,985,288 - -0.2
2,985,350 + +0.2
2,985,364 + -1.2
2,985,364 + +0.4
2,985,389 - -1.5
2,985,425 + +0.3
2,985,534 - -0.3
2,985,539 - -1.9
2,985,593 + -0.4
2,985,609 + -1.4
2,985,714 - HP15_2843 0.13 +0.9
2,985,750 + HP15_2843 0.21 +1.0
2,985,753 - HP15_2843 0.22 -0.5
2,985,825 + HP15_2843 0.38 -0.0
2,985,833 - HP15_2843 0.40 +1.8
2,985,843 - HP15_2843 0.42 -0.5
2,985,847 - HP15_2843 0.43 +0.2
2,985,968 + HP15_2843 0.70 +0.7
2,985,976 - HP15_2843 0.72 +0.5
2,985,976 - HP15_2843 0.72 +0.4
2,985,981 - HP15_2843 0.73 +2.2
2,985,981 - HP15_2843 0.73 -0.0
2,985,981 - HP15_2843 0.73 +0.3
2,986,030 - HP15_2843 0.84 +0.1
2,986,072 + -1.6
2,986,096 - -0.4
2,986,214 - -0.5
2,986,214 - -1.0
2,986,279 - HP15_2844 0.35 -2.1
2,986,321 + HP15_2844 0.60 -1.1
2,986,562 + HP15_2845 0.21 +0.4
2,986,697 + HP15_2845 0.41 +0.5
2,986,783 + HP15_2845 0.53 +0.7
2,986,924 - HP15_2845 0.74 -0.4
2,986,976 + HP15_2845 0.82 +0.5
2,987,044 + +0.4

Or see this region's nucleotide sequence