Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c27720

Experiment: m.b. Phosphomycin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Phosphomycin 2 mg/ml
2,888,579	+				+0.3
2,888,587	-				+0.8
2,888,648	-				-0.5
2,888,704	-				-1.0
2,888,708	-				+0.3
2,888,810	+		PGA1_c27710	0.20	+0.0
2,888,810	+		PGA1_c27710	0.20	-1.6
2,888,817	+		PGA1_c27710	0.21	-0.5
2,888,818	-		PGA1_c27710	0.21	-0.5
2,888,867	+		PGA1_c27710	0.28	+0.1
2,888,867	+		PGA1_c27710	0.28	-0.5
2,888,867	+		PGA1_c27710	0.28	-0.2
2,888,874	+		PGA1_c27710	0.29	+0.2
2,888,875	-		PGA1_c27710	0.29	+0.4
2,888,919	-		PGA1_c27710	0.35	+1.2
2,888,926	+		PGA1_c27710	0.36	-0.7
2,888,934	-		PGA1_c27710	0.37	-1.2
2,888,934	-		PGA1_c27710	0.37	+0.1
2,888,934	-		PGA1_c27710	0.37	+0.3
2,888,969	+		PGA1_c27710	0.42	-0.3
2,888,969	+		PGA1_c27710	0.42	+1.1
2,888,969	+		PGA1_c27710	0.42	-0.7
2,888,969	+		PGA1_c27710	0.42	+0.7
2,888,977	-		PGA1_c27710	0.43	+0.2
2,888,977	-		PGA1_c27710	0.43	+0.9
2,888,977	-		PGA1_c27710	0.43	-0.5
2,888,977	-		PGA1_c27710	0.43	-1.0
2,888,977	-		PGA1_c27710	0.43	-0.8
2,888,977	-		PGA1_c27710	0.43	+1.6
2,888,977	-		PGA1_c27710	0.43	-1.0
2,888,977	-		PGA1_c27710	0.43	+0.4
2,889,015	-		PGA1_c27710	0.48	+0.6
2,889,015	-		PGA1_c27710	0.48	+0.3
2,889,038	+		PGA1_c27710	0.51	-0.2
2,889,100	-		PGA1_c27710	0.60	+1.2
2,889,130	+		PGA1_c27710	0.64	-0.1
2,889,152	-		PGA1_c27710	0.67	+0.8
2,889,186	+		PGA1_c27710	0.71	-1.4
2,889,247	-		PGA1_c27710	0.80	-0.4
2,889,281	-		PGA1_c27710	0.84	-0.3
2,889,285	+		PGA1_c27710	0.85	-0.8
2,889,286	-		PGA1_c27710	0.85	+0.5
2,889,301	-		PGA1_c27710	0.87	-0.2
2,889,354	-				-2.1
2,889,394	-				+0.0
2,889,433	+				+0.6
2,889,433	+				+0.4
2,889,470	-				-0.1
2,889,470	-				-0.7
2,889,482	-				+0.3
2,889,492	-				-1.0
2,889,524	+				+0.5
2,889,532	-				+0.2
2,889,542	-				-2.0
2,889,566	+				+0.6
2,889,573	-				+0.8
2,889,605	+				-0.6
2,889,605	+				-0.3
2,889,691	-		PGA1_c27720	0.11	-0.2
2,889,766	-		PGA1_c27720	0.18	-0.4
2,889,771	+		PGA1_c27720	0.19	+1.0
2,889,776	+		PGA1_c27720	0.19	+1.6
2,889,792	+		PGA1_c27720	0.21	+0.5
2,889,794	-		PGA1_c27720	0.21	-0.2
2,889,796	+		PGA1_c27720	0.21	-0.3
2,889,860	+		PGA1_c27720	0.27	+1.4
2,889,860	+		PGA1_c27720	0.27	-0.6
2,889,860	+		PGA1_c27720	0.27	+0.4
2,889,861	+		PGA1_c27720	0.27	+1.2
2,889,868	-		PGA1_c27720	0.28	-1.5
2,889,891	+		PGA1_c27720	0.30	-0.2
2,889,899	-		PGA1_c27720	0.31	+0.4
2,889,904	-		PGA1_c27720	0.31	-0.6
2,889,923	-		PGA1_c27720	0.33	+0.6
2,889,992	-		PGA1_c27720	0.39	+0.8
2,889,993	-		PGA1_c27720	0.39	+0.1
2,890,008	+		PGA1_c27720	0.41	+0.7
2,890,010	+		PGA1_c27720	0.41	+0.6
2,890,146	+		PGA1_c27720	0.54	-0.7
2,890,177	-		PGA1_c27720	0.57	+0.1
2,890,341	+		PGA1_c27720	0.72	-0.8
2,890,415	-		PGA1_c27720	0.79	+0.2
2,890,416	-		PGA1_c27720	0.79	-0.8
2,890,416	-		PGA1_c27720	0.79	+0.9
2,890,583	+				+0.2
2,890,590	+				-0.4
2,890,591	-				-0.5
2,890,591	-				-0.1
2,890,591	-				+0.9
2,890,591	-				+0.0
2,890,591	-				-1.6
2,890,591	-				-0.8
2,890,625	+				+0.2
2,890,626	+				+0.4
2,890,626	+				+0.8
2,890,631	+				-0.9
2,890,631	+				-0.2
2,890,631	+				-0.9
2,890,634	-				-0.6
2,890,634	-				+2.0
2,890,639	-				+0.7
2,890,639	-				+0.7
2,890,639	-				-0.8
2,890,720	-				+0.2
2,890,738	+		PGA1_c27730	0.12	+0.6
2,890,746	-		PGA1_c27730	0.13	-1.1
2,890,748	+		PGA1_c27730	0.14	+0.1
2,890,841	-		PGA1_c27730	0.27	+1.1
2,890,895	+		PGA1_c27730	0.34	-2.4
2,890,990	-		PGA1_c27730	0.48	-0.3
2,891,157	-		PGA1_c27730	0.71	-0.2
2,891,194	+		PGA1_c27730	0.77	+0.3
2,891,229	+		PGA1_c27730	0.82	+0.6
2,891,245	-		PGA1_c27730	0.84	+1.2
2,891,249	-		PGA1_c27730	0.84	-0.2
2,891,259	-		PGA1_c27730	0.86	-0.0
2,891,273	+		PGA1_c27730	0.88	+0.8
2,891,278	+		PGA1_c27730	0.89	+0.4
2,891,278	+		PGA1_c27730	0.89	+0.5
2,891,286	-		PGA1_c27730	0.90	+0.3
2,891,286	-		PGA1_c27730	0.90	-0.2
2,891,337	-				+0.9
2,891,339	+				+0.3
2,891,343	+				+1.0
2,891,351	-				+0.0
2,891,351	-				-0.3
2,891,478	+		PGA1_c27740	0.25	+0.3
2,891,486	-		PGA1_c27740	0.27	-1.0
2,891,503	-		PGA1_c27740	0.30	-0.6
2,891,510	-		PGA1_c27740	0.32	-0.1
2,891,549	-		PGA1_c27740	0.40	-0.6
2,891,634	-		PGA1_c27740	0.58	-0.3