Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2645 and HP15_2646 are separated by 85 nucleotides HP15_2646 and HP15_2647 are separated by 99 nucleotides
HP15_2645: HP15_2645 - methyl-accepting chemotaxis protein, at 2,794,335 to 2,796,212
_2645
HP15_2646: HP15_2646 - radical SAM domain protein, at 2,796,298 to 2,797,359
_2646
HP15_2647: HP15_2647 - peptidoglycan-binding domain 1 protein, at 2,797,459 to 2,799,111
_2647
Position (kb)
2796
2797
2798 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 2795.484 kb on - strand, within HP15_2645 at 2795.535 kb on - strand, within HP15_2645 at 2795.562 kb on + strand, within HP15_2645 at 2795.570 kb on - strand, within HP15_2645 at 2795.644 kb on - strand, within HP15_2645 at 2795.726 kb on - strand, within HP15_2645 at 2795.928 kb on + strand, within HP15_2645 at 2795.943 kb on + strand, within HP15_2645 at 2796.053 kb on - strand at 2796.182 kb on + strand at 2796.186 kb on - strand at 2796.207 kb on + strand at 2796.219 kb on + strand at 2796.227 kb on - strand at 2796.243 kb on + strand at 2796.316 kb on + strand at 2796.345 kb on + strand at 2796.385 kb on - strand at 2796.489 kb on - strand, within HP15_2646 at 2796.545 kb on + strand, within HP15_2646 at 2796.645 kb on - strand, within HP15_2646 at 2796.649 kb on + strand, within HP15_2646 at 2796.806 kb on + strand, within HP15_2646 at 2796.840 kb on + strand, within HP15_2646 at 2796.840 kb on + strand, within HP15_2646 at 2796.848 kb on - strand, within HP15_2646 at 2796.876 kb on - strand, within HP15_2646 at 2796.927 kb on + strand, within HP15_2646 at 2796.945 kb on + strand, within HP15_2646 at 2797.139 kb on + strand, within HP15_2646 at 2797.147 kb on - strand, within HP15_2646 at 2797.187 kb on + strand, within HP15_2646 at 2797.245 kb on - strand, within HP15_2646 at 2797.295 kb on + strand at 2797.351 kb on + strand at 2797.402 kb on + strand at 2797.431 kb on + strand at 2797.694 kb on + strand, within HP15_2647 at 2797.771 kb on - strand, within HP15_2647 at 2797.804 kb on - strand, within HP15_2647 at 2797.823 kb on + strand, within HP15_2647 at 2797.828 kb on - strand, within HP15_2647 at 2798.000 kb on + strand, within HP15_2647 at 2798.028 kb on + strand, within HP15_2647 at 2798.033 kb on + strand, within HP15_2647 at 2798.033 kb on + strand, within HP15_2647 at 2798.080 kb on + strand, within HP15_2647 at 2798.155 kb on - strand, within HP15_2647 at 2798.175 kb on + strand, within HP15_2647
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 2,795,484 - HP15_2645 0.61 -1.5 2,795,535 - HP15_2645 0.64 +0.8 2,795,562 + HP15_2645 0.65 +0.5 2,795,570 - HP15_2645 0.66 +0.0 2,795,644 - HP15_2645 0.70 +0.2 2,795,726 - HP15_2645 0.74 -0.5 2,795,928 + HP15_2645 0.85 +0.4 2,795,943 + HP15_2645 0.86 -0.1 2,796,053 - +0.4 2,796,182 + -0.0 2,796,186 - +2.0 2,796,207 + -0.4 2,796,219 + +0.0 2,796,227 - +0.3 2,796,243 + -1.2 2,796,316 + +0.3 2,796,345 + -0.8 2,796,385 - -0.0 2,796,489 - HP15_2646 0.18 +0.5 2,796,545 + HP15_2646 0.23 -0.3 2,796,645 - HP15_2646 0.33 -1.7 2,796,649 + HP15_2646 0.33 -2.5 2,796,806 + HP15_2646 0.48 +0.4 2,796,840 + HP15_2646 0.51 -0.9 2,796,840 + HP15_2646 0.51 -1.4 2,796,848 - HP15_2646 0.52 -1.0 2,796,876 - HP15_2646 0.54 +0.1 2,796,927 + HP15_2646 0.59 -0.7 2,796,945 + HP15_2646 0.61 +0.2 2,797,139 + HP15_2646 0.79 -0.9 2,797,147 - HP15_2646 0.80 +0.8 2,797,187 + HP15_2646 0.84 +0.4 2,797,245 - HP15_2646 0.89 +0.5 2,797,295 + +0.1 2,797,351 + +0.0 2,797,402 + +4.2 2,797,431 + +0.8 2,797,694 + HP15_2647 0.14 -0.0 2,797,771 - HP15_2647 0.19 -0.2 2,797,804 - HP15_2647 0.21 +0.4 2,797,823 + HP15_2647 0.22 +0.7 2,797,828 - HP15_2647 0.22 -0.7 2,798,000 + HP15_2647 0.33 -1.0 2,798,028 + HP15_2647 0.34 +0.2 2,798,033 + HP15_2647 0.35 -0.1 2,798,033 + HP15_2647 0.35 -2.4 2,798,080 + HP15_2647 0.38 +1.3 2,798,155 - HP15_2647 0.42 +0.6 2,798,175 + HP15_2647 0.43 -0.1
Or see this region's nucleotide sequence