Strain Fitness in Marinobacter adhaerens HP15 around HP15_2232

Experiment: m.b. Zinc 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2231 and HP15_2232 are separated by 99 nucleotidesHP15_2232 and HP15_2233 are separated by 115 nucleotides HP15_2231: HP15_2231 - pitrilysin metallopeptidase 1, at 2,348,903 to 2,351,827 _2231 HP15_2232: HP15_2232 - conserved hypothetical protein, membrane, at 2,351,927 to 2,352,388 _2232 HP15_2233: HP15_2233 - MORN repeat protein, at 2,352,504 to 2,353,817 _2233 Position (kb) 2351 2352 2353Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2350.995 kb on + strand, within HP15_2231at 2350.995 kb on + strand, within HP15_2231at 2351.005 kb on + strand, within HP15_2231at 2351.005 kb on + strand, within HP15_2231at 2351.005 kb on + strand, within HP15_2231at 2351.005 kb on + strand, within HP15_2231at 2351.005 kb on + strand, within HP15_2231at 2351.008 kb on - strand, within HP15_2231at 2351.010 kb on + strand, within HP15_2231at 2351.010 kb on + strand, within HP15_2231at 2351.013 kb on - strand, within HP15_2231at 2351.013 kb on - strand, within HP15_2231at 2351.013 kb on - strand, within HP15_2231at 2351.018 kb on - strand, within HP15_2231at 2351.018 kb on - strand, within HP15_2231at 2351.092 kb on + strand, within HP15_2231at 2351.287 kb on + strand, within HP15_2231at 2351.287 kb on + strand, within HP15_2231at 2351.495 kb on + strand, within HP15_2231at 2351.495 kb on + strand, within HP15_2231at 2351.495 kb on + strand, within HP15_2231at 2351.503 kb on - strand, within HP15_2231at 2351.622 kb on - strandat 2351.748 kb on - strandat 2351.800 kb on - strandat 2351.905 kb on + strandat 2351.905 kb on - strandat 2351.914 kb on - strandat 2351.921 kb on - strandat 2352.056 kb on - strand, within HP15_2232at 2352.144 kb on + strand, within HP15_2232at 2352.165 kb on + strand, within HP15_2232at 2352.353 kb on - strandat 2352.442 kb on - strandat 2352.562 kb on - strandat 2352.692 kb on + strand, within HP15_2233at 2352.705 kb on - strand, within HP15_2233at 2352.711 kb on + strand, within HP15_2233at 2352.775 kb on + strand, within HP15_2233at 2352.775 kb on + strand, within HP15_2233at 2352.999 kb on - strand, within HP15_2233at 2353.026 kb on + strand, within HP15_2233at 2353.180 kb on + strand, within HP15_2233at 2353.256 kb on + strand, within HP15_2233at 2353.303 kb on - strand, within HP15_2233at 2353.303 kb on - strand, within HP15_2233

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM
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2,350,995 + HP15_2231 0.72 -0.8
2,350,995 + HP15_2231 0.72 -0.3
2,351,005 + HP15_2231 0.72 -0.7
2,351,005 + HP15_2231 0.72 -0.1
2,351,005 + HP15_2231 0.72 -0.2
2,351,005 + HP15_2231 0.72 -0.8
2,351,005 + HP15_2231 0.72 +0.1
2,351,008 - HP15_2231 0.72 +0.7
2,351,010 + HP15_2231 0.72 -0.3
2,351,010 + HP15_2231 0.72 -0.0
2,351,013 - HP15_2231 0.72 +0.6
2,351,013 - HP15_2231 0.72 +0.7
2,351,013 - HP15_2231 0.72 +0.2
2,351,018 - HP15_2231 0.72 +0.5
2,351,018 - HP15_2231 0.72 -1.0
2,351,092 + HP15_2231 0.75 -1.3
2,351,287 + HP15_2231 0.82 +0.9
2,351,287 + HP15_2231 0.82 -0.9
2,351,495 + HP15_2231 0.89 +0.4
2,351,495 + HP15_2231 0.89 +0.3
2,351,495 + HP15_2231 0.89 -0.3
2,351,503 - HP15_2231 0.89 -3.0
2,351,622 - +0.1
2,351,748 - -1.4
2,351,800 - -0.4
2,351,905 + -1.2
2,351,905 - -0.9
2,351,914 - +1.8
2,351,921 - +0.7
2,352,056 - HP15_2232 0.28 +0.1
2,352,144 + HP15_2232 0.47 +0.5
2,352,165 + HP15_2232 0.52 -1.0
2,352,353 - +0.5
2,352,442 - -0.0
2,352,562 - +0.3
2,352,692 + HP15_2233 0.14 +0.2
2,352,705 - HP15_2233 0.15 +0.0
2,352,711 + HP15_2233 0.16 +0.5
2,352,775 + HP15_2233 0.21 +0.5
2,352,775 + HP15_2233 0.21 -1.4
2,352,999 - HP15_2233 0.38 +0.7
2,353,026 + HP15_2233 0.40 -1.8
2,353,180 + HP15_2233 0.51 +0.1
2,353,256 + HP15_2233 0.57 -0.0
2,353,303 - HP15_2233 0.61 +1.2
2,353,303 - HP15_2233 0.61 -0.3

Or see this region's nucleotide sequence