Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1805 and HP15_1806 are separated by 168 nucleotides HP15_1806 and HP15_1807 are separated by 12 nucleotides
HP15_1805: HP15_1805 - hydroxyacylglutathione hydrolase, at 1,897,102 to 1,897,896
_1805
HP15_1806: HP15_1806 - membrane-bound lytic murein transglycosylase D precursor, at 1,898,065 to 1,899,765
_1806
HP15_1807: HP15_1807 - peptide ABC transporter, periplasmic peptide-binding protein, at 1,899,778 to 1,901,601
_1807
Position (kb)
1898
1899
1900 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1897.097 kb on + strand at 1897.097 kb on + strand at 1897.097 kb on + strand at 1897.097 kb on + strand at 1897.097 kb on + strand at 1897.105 kb on - strand at 1897.105 kb on - strand at 1897.105 kb on - strand at 1897.210 kb on + strand, within HP15_1805 at 1897.218 kb on - strand, within HP15_1805 at 1897.278 kb on - strand, within HP15_1805 at 1897.335 kb on - strand, within HP15_1805 at 1897.412 kb on + strand, within HP15_1805 at 1897.481 kb on - strand, within HP15_1805 at 1897.534 kb on + strand, within HP15_1805 at 1897.570 kb on + strand, within HP15_1805 at 1897.570 kb on + strand, within HP15_1805 at 1897.578 kb on - strand, within HP15_1805 at 1897.615 kb on + strand, within HP15_1805 at 1897.925 kb on + strand at 1899.258 kb on + strand, within HP15_1806 at 1899.335 kb on + strand, within HP15_1806 at 1899.404 kb on + strand, within HP15_1806 at 1899.422 kb on - strand, within HP15_1806 at 1899.560 kb on - strand, within HP15_1806 at 1899.699 kb on - strand at 1899.804 kb on - strand at 1899.821 kb on - strand at 1899.832 kb on - strand at 1900.076 kb on - strand, within HP15_1807 at 1900.304 kb on + strand, within HP15_1807 at 1900.409 kb on - strand, within HP15_1807 at 1900.476 kb on + strand, within HP15_1807 at 1900.484 kb on - strand, within HP15_1807 at 1900.562 kb on - strand, within HP15_1807 at 1900.577 kb on - strand, within HP15_1807 at 1900.614 kb on + strand, within HP15_1807
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 1,897,097 + -0.5 1,897,097 + -0.6 1,897,097 + -0.0 1,897,097 + -2.1 1,897,097 + -0.6 1,897,105 - -1.0 1,897,105 - -2.0 1,897,105 - -1.3 1,897,210 + HP15_1805 0.14 -1.1 1,897,218 - HP15_1805 0.15 -1.6 1,897,278 - HP15_1805 0.22 -1.5 1,897,335 - HP15_1805 0.29 -1.4 1,897,412 + HP15_1805 0.39 -2.5 1,897,481 - HP15_1805 0.48 -1.0 1,897,534 + HP15_1805 0.54 -0.4 1,897,570 + HP15_1805 0.59 -1.0 1,897,570 + HP15_1805 0.59 -1.7 1,897,578 - HP15_1805 0.60 -3.0 1,897,615 + HP15_1805 0.65 -1.2 1,897,925 + -0.7 1,899,258 + HP15_1806 0.70 -4.6 1,899,335 + HP15_1806 0.75 -3.0 1,899,404 + HP15_1806 0.79 -2.6 1,899,422 - HP15_1806 0.80 -1.6 1,899,560 - HP15_1806 0.88 -1.6 1,899,699 - -2.5 1,899,804 - +0.5 1,899,821 - +2.7 1,899,832 - -1.2 1,900,076 - HP15_1807 0.16 +1.3 1,900,304 + HP15_1807 0.29 -2.0 1,900,409 - HP15_1807 0.35 -0.2 1,900,476 + HP15_1807 0.38 -0.3 1,900,484 - HP15_1807 0.39 +0.5 1,900,562 - HP15_1807 0.43 +1.1 1,900,577 - HP15_1807 0.44 +0.4 1,900,614 + HP15_1807 0.46 +0.7
Or see this region's nucleotide sequence