Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1803 and HP15_1804 are separated by 28 nucleotides HP15_1804 and HP15_1805 are separated by 96 nucleotides HP15_1805 and HP15_1806 are separated by 168 nucleotides
HP15_1803: HP15_1803 - ribonuclease Hi chain A-like protein, at 1,895,739 to 1,896,182
_1803
HP15_1804: HP15_1804 - generic methyl-transferase, at 1,896,211 to 1,897,005
_1804
HP15_1805: HP15_1805 - hydroxyacylglutathione hydrolase, at 1,897,102 to 1,897,896
_1805
HP15_1806: HP15_1806 - membrane-bound lytic murein transglycosylase D precursor, at 1,898,065 to 1,899,765
_1806
Position (kb)
1897
1898 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1896.275 kb on + strand at 1896.480 kb on + strand, within HP15_1804 at 1896.547 kb on - strand, within HP15_1804 at 1896.581 kb on + strand, within HP15_1804 at 1896.589 kb on + strand, within HP15_1804 at 1896.612 kb on + strand, within HP15_1804 at 1896.666 kb on - strand, within HP15_1804 at 1896.674 kb on + strand, within HP15_1804 at 1896.738 kb on - strand, within HP15_1804 at 1896.794 kb on + strand, within HP15_1804 at 1896.794 kb on + strand, within HP15_1804 at 1896.939 kb on - strand at 1896.939 kb on - strand at 1896.939 kb on - strand at 1896.949 kb on - strand at 1896.961 kb on + strand at 1896.961 kb on + strand at 1897.018 kb on + strand at 1897.045 kb on - strand at 1897.046 kb on - strand at 1897.097 kb on + strand at 1897.097 kb on + strand at 1897.097 kb on + strand at 1897.097 kb on + strand at 1897.097 kb on + strand at 1897.105 kb on - strand at 1897.105 kb on - strand at 1897.105 kb on - strand at 1897.210 kb on + strand, within HP15_1805 at 1897.218 kb on - strand, within HP15_1805 at 1897.278 kb on - strand, within HP15_1805 at 1897.335 kb on - strand, within HP15_1805 at 1897.412 kb on + strand, within HP15_1805 at 1897.481 kb on - strand, within HP15_1805 at 1897.534 kb on + strand, within HP15_1805 at 1897.570 kb on + strand, within HP15_1805 at 1897.570 kb on + strand, within HP15_1805 at 1897.578 kb on - strand, within HP15_1805 at 1897.615 kb on + strand, within HP15_1805 at 1897.925 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 1,896,275 + +0.9 1,896,480 + HP15_1804 0.34 +0.2 1,896,547 - HP15_1804 0.42 +1.1 1,896,581 + HP15_1804 0.47 -0.1 1,896,589 + HP15_1804 0.48 +0.7 1,896,612 + HP15_1804 0.50 -0.7 1,896,666 - HP15_1804 0.57 +0.4 1,896,674 + HP15_1804 0.58 +0.4 1,896,738 - HP15_1804 0.66 +0.5 1,896,794 + HP15_1804 0.73 +0.3 1,896,794 + HP15_1804 0.73 -0.5 1,896,939 - +0.5 1,896,939 - -0.7 1,896,939 - +0.9 1,896,949 - +1.5 1,896,961 + +0.9 1,896,961 + +0.6 1,897,018 + -0.2 1,897,045 - +0.6 1,897,046 - +0.9 1,897,097 + -0.5 1,897,097 + -0.6 1,897,097 + -0.0 1,897,097 + -2.1 1,897,097 + -0.6 1,897,105 - -1.0 1,897,105 - -2.0 1,897,105 - -1.3 1,897,210 + HP15_1805 0.14 -1.1 1,897,218 - HP15_1805 0.15 -1.6 1,897,278 - HP15_1805 0.22 -1.5 1,897,335 - HP15_1805 0.29 -1.4 1,897,412 + HP15_1805 0.39 -2.5 1,897,481 - HP15_1805 0.48 -1.0 1,897,534 + HP15_1805 0.54 -0.4 1,897,570 + HP15_1805 0.59 -1.0 1,897,570 + HP15_1805 0.59 -1.7 1,897,578 - HP15_1805 0.60 -3.0 1,897,615 + HP15_1805 0.65 -1.2 1,897,925 + -0.7
Or see this region's nucleotide sequence