Experiment: m.b. Phosphomycin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c15730 and PGA1_c15740 are separated by 2 nucleotides PGA1_c15740 and PGA1_c15750 are separated by 14 nucleotides PGA1_c15750 and PGA1_c15760 are separated by 12 nucleotides
PGA1_c15730: PGA1_c15730 - phosphate regulon transcriptional regulatory protein PhoB, at 1,633,104 to 1,633,793
_c15730
PGA1_c15740: PGA1_c15740 - phosphate transport system protein PhoU, at 1,633,796 to 1,634,506
_c15740
PGA1_c15750: PGA1_c15750 - phosphate import ATP-binding protein PstB, at 1,634,521 to 1,635,318
_c15750
PGA1_c15760: PGA1_c15760 - putative phosphate transport system permease protein PstA, at 1,635,331 to 1,636,701
_c15760
Position (kb)
1634
1635
1636 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1633.523 kb on + strand, within PGA1_c15730 at 1633.595 kb on + strand, within PGA1_c15730 at 1633.595 kb on + strand, within PGA1_c15730 at 1633.603 kb on - strand, within PGA1_c15730 at 1633.603 kb on - strand, within PGA1_c15730 at 1633.673 kb on - strand, within PGA1_c15730 at 1633.794 kb on + strand at 1633.802 kb on - strand at 1633.954 kb on + strand, within PGA1_c15740 at 1634.059 kb on + strand, within PGA1_c15740 at 1634.155 kb on + strand, within PGA1_c15740 at 1634.155 kb on + strand, within PGA1_c15740 at 1634.168 kb on + strand, within PGA1_c15740 at 1634.436 kb on - strand at 1634.653 kb on + strand, within PGA1_c15750 at 1634.687 kb on - strand, within PGA1_c15750 at 1634.745 kb on + strand, within PGA1_c15750 at 1634.750 kb on + strand, within PGA1_c15750 at 1634.755 kb on + strand, within PGA1_c15750 at 1634.758 kb on - strand, within PGA1_c15750 at 1634.758 kb on - strand, within PGA1_c15750 at 1634.758 kb on - strand, within PGA1_c15750 at 1635.014 kb on + strand, within PGA1_c15750 at 1635.018 kb on - strand, within PGA1_c15750 at 1635.126 kb on + strand, within PGA1_c15750 at 1635.126 kb on + strand, within PGA1_c15750 at 1635.134 kb on - strand, within PGA1_c15750 at 1635.134 kb on - strand, within PGA1_c15750 at 1635.290 kb on + strand at 1635.298 kb on - strand at 1635.298 kb on - strand at 1635.327 kb on + strand at 1635.345 kb on - strand at 1635.368 kb on + strand at 1635.368 kb on - strand at 1635.368 kb on - strand at 1635.424 kb on - strand at 1635.584 kb on + strand, within PGA1_c15760 at 1635.654 kb on - strand, within PGA1_c15760 at 1635.771 kb on - strand, within PGA1_c15760 at 1635.772 kb on - strand, within PGA1_c15760 at 1635.932 kb on - strand, within PGA1_c15760 at 1635.932 kb on - strand, within PGA1_c15760 at 1636.071 kb on + strand, within PGA1_c15760 at 1636.126 kb on - strand, within PGA1_c15760 at 1636.162 kb on + strand, within PGA1_c15760 at 1636.171 kb on + strand, within PGA1_c15760
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Phosphomycin 2 mg/ml remove 1,633,523 + PGA1_c15730 0.61 +1.0 1,633,595 + PGA1_c15730 0.71 -0.1 1,633,595 + PGA1_c15730 0.71 -2.3 1,633,603 - PGA1_c15730 0.72 -0.4 1,633,603 - PGA1_c15730 0.72 +1.1 1,633,673 - PGA1_c15730 0.82 -0.5 1,633,794 + +0.4 1,633,802 - +0.3 1,633,954 + PGA1_c15740 0.22 +1.2 1,634,059 + PGA1_c15740 0.37 -0.1 1,634,155 + PGA1_c15740 0.50 -0.3 1,634,155 + PGA1_c15740 0.50 +0.1 1,634,168 + PGA1_c15740 0.52 +1.8 1,634,436 - +0.8 1,634,653 + PGA1_c15750 0.17 +0.6 1,634,687 - PGA1_c15750 0.21 -3.0 1,634,745 + PGA1_c15750 0.28 +0.3 1,634,750 + PGA1_c15750 0.29 +0.4 1,634,755 + PGA1_c15750 0.29 +1.5 1,634,758 - PGA1_c15750 0.30 -2.9 1,634,758 - PGA1_c15750 0.30 -2.6 1,634,758 - PGA1_c15750 0.30 -2.5 1,635,014 + PGA1_c15750 0.62 +0.6 1,635,018 - PGA1_c15750 0.62 -2.2 1,635,126 + PGA1_c15750 0.76 +0.7 1,635,126 + PGA1_c15750 0.76 +1.1 1,635,134 - PGA1_c15750 0.77 -0.8 1,635,134 - PGA1_c15750 0.77 -0.5 1,635,290 + +1.6 1,635,298 - -1.3 1,635,298 - -0.1 1,635,327 + -1.6 1,635,345 - -1.8 1,635,368 + +0.1 1,635,368 - -2.0 1,635,368 - -1.3 1,635,424 - -1.7 1,635,584 + PGA1_c15760 0.18 -1.7 1,635,654 - PGA1_c15760 0.24 -1.5 1,635,771 - PGA1_c15760 0.32 -2.5 1,635,772 - PGA1_c15760 0.32 -2.7 1,635,932 - PGA1_c15760 0.44 -1.4 1,635,932 - PGA1_c15760 0.44 -1.5 1,636,071 + PGA1_c15760 0.54 +0.8 1,636,126 - PGA1_c15760 0.58 -2.5 1,636,162 + PGA1_c15760 0.61 +0.3 1,636,171 + PGA1_c15760 0.61 +0.2
Or see this region's nucleotide sequence