Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1449 and HP15_1450 are separated by 9 nucleotides HP15_1450 and HP15_1451 are separated by 66 nucleotides HP15_1451 and HP15_1452 are separated by 133 nucleotides HP15_1452 and HP15_1453 overlap by 12 nucleotides
HP15_1449: HP15_1449 - ABC transporter, ATP-binding protein, at 1,525,184 to 1,525,978
_1449
HP15_1450: HP15_1450 - inner-membrane translocator, at 1,525,988 to 1,526,890
_1450
HP15_1451: HP15_1451 - ABC-type uncharacterized transport system, periplasmic component, at 1,526,957 to 1,527,931
_1451
HP15_1452: HP15_1452 - hypothetical protein, at 1,528,065 to 1,528,214
_1452
HP15_1453: HP15_1453 - long-chain acyl-CoA synthetase, at 1,528,203 to 1,529,840
_1453
Position (kb)
1526
1527
1528 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1526.026 kb on + strand at 1526.053 kb on + strand at 1526.190 kb on - strand, within HP15_1450 at 1526.230 kb on + strand, within HP15_1450 at 1526.276 kb on - strand, within HP15_1450 at 1526.316 kb on - strand, within HP15_1450 at 1526.506 kb on + strand, within HP15_1450 at 1526.594 kb on - strand, within HP15_1450 at 1526.611 kb on + strand, within HP15_1450 at 1526.725 kb on + strand, within HP15_1450 at 1526.838 kb on + strand at 1527.177 kb on - strand, within HP15_1451 at 1527.305 kb on - strand, within HP15_1451 at 1527.323 kb on + strand, within HP15_1451 at 1527.354 kb on + strand, within HP15_1451 at 1527.364 kb on + strand, within HP15_1451 at 1527.372 kb on - strand, within HP15_1451 at 1527.372 kb on - strand, within HP15_1451 at 1527.372 kb on - strand, within HP15_1451 at 1527.434 kb on + strand, within HP15_1451 at 1527.434 kb on + strand, within HP15_1451 at 1527.434 kb on + strand, within HP15_1451 at 1527.442 kb on - strand, within HP15_1451 at 1527.608 kb on + strand, within HP15_1451 at 1527.742 kb on + strand, within HP15_1451 at 1527.757 kb on - strand, within HP15_1451 at 1527.760 kb on + strand, within HP15_1451 at 1527.799 kb on + strand, within HP15_1451 at 1527.821 kb on + strand, within HP15_1451 at 1527.905 kb on - strand at 1527.905 kb on - strand at 1527.911 kb on + strand at 1527.916 kb on + strand at 1527.921 kb on + strand at 1527.940 kb on - strand at 1528.010 kb on + strand at 1528.290 kb on - strand at 1528.447 kb on + strand, within HP15_1453 at 1528.454 kb on + strand, within HP15_1453 at 1528.617 kb on - strand, within HP15_1453 at 1528.661 kb on - strand, within HP15_1453 at 1528.720 kb on - strand, within HP15_1453 at 1528.750 kb on + strand, within HP15_1453 at 1528.773 kb on - strand, within HP15_1453 at 1528.824 kb on + strand, within HP15_1453
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 1,526,026 + +1.0 1,526,053 + -0.9 1,526,190 - HP15_1450 0.22 -0.9 1,526,230 + HP15_1450 0.27 +0.6 1,526,276 - HP15_1450 0.32 +0.7 1,526,316 - HP15_1450 0.36 +0.6 1,526,506 + HP15_1450 0.57 -0.6 1,526,594 - HP15_1450 0.67 +0.5 1,526,611 + HP15_1450 0.69 -1.6 1,526,725 + HP15_1450 0.82 +0.4 1,526,838 + -0.4 1,527,177 - HP15_1451 0.23 +0.1 1,527,305 - HP15_1451 0.36 -1.0 1,527,323 + HP15_1451 0.38 +1.5 1,527,354 + HP15_1451 0.41 -0.8 1,527,364 + HP15_1451 0.42 +1.0 1,527,372 - HP15_1451 0.43 +0.2 1,527,372 - HP15_1451 0.43 +0.4 1,527,372 - HP15_1451 0.43 +1.6 1,527,434 + HP15_1451 0.49 +0.7 1,527,434 + HP15_1451 0.49 +0.3 1,527,434 + HP15_1451 0.49 +0.5 1,527,442 - HP15_1451 0.50 +0.1 1,527,608 + HP15_1451 0.67 +0.3 1,527,742 + HP15_1451 0.81 +0.6 1,527,757 - HP15_1451 0.82 +0.3 1,527,760 + HP15_1451 0.82 -0.2 1,527,799 + HP15_1451 0.86 -0.0 1,527,821 + HP15_1451 0.89 +0.2 1,527,905 - -1.7 1,527,905 - +0.2 1,527,911 + +0.3 1,527,916 + +0.4 1,527,921 + +0.7 1,527,940 - +0.5 1,528,010 + -1.1 1,528,290 - -0.1 1,528,447 + HP15_1453 0.15 -0.4 1,528,454 + HP15_1453 0.15 +0.6 1,528,617 - HP15_1453 0.25 +0.8 1,528,661 - HP15_1453 0.28 +0.9 1,528,720 - HP15_1453 0.32 -0.3 1,528,750 + HP15_1453 0.33 +0.1 1,528,773 - HP15_1453 0.35 -0.6 1,528,824 + HP15_1453 0.38 -3.5
Or see this region's nucleotide sequence