Strain Fitness in Pantoea sp. MT58 around IAI47_21360

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50
6,150	-				+0.2
6,155	+				-1.1
6,155	+				-1.9
6,163	+				-0.7
6,164	-				-0.6
6,164	-				+2.0
6,164	-				-2.6
6,164	-				-0.8
6,164	-				+2.5
6,182	-				+1.7
6,214	-				+0.4
6,268	-				+0.6
6,299	-				+0.7
6,306	-				-0.8
6,306	-				-2.0
6,326	+				+0.5
6,327	-				+0.1
6,344	-				-1.6
6,347	-				-1.1
6,349	+				+0.2
6,354	-				-0.6
6,385	+				+1.1
6,426	-				+0.6
6,426	-				-0.8
6,433	+				+0.3
6,443	-				-0.2
6,492	+				-2.7
6,493	-				-0.1
6,558	+				+0.5
6,558	+				-0.5
6,562	-				-0.1
6,570	-				+0.3
6,584	-				-1.7
6,584	-				+2.0
6,584	-				+0.5
6,687	-		IAI47_21355	0.52	+1.0
6,687	-		IAI47_21355	0.52	-0.1
6,687	-		IAI47_21355	0.52	+0.9
6,687	-		IAI47_21355	0.52	-1.9
6,690	+		IAI47_21355	0.54	-0.3
6,691	-		IAI47_21355	0.54	-0.4
6,706	+		IAI47_21355	0.62	-1.5
6,784	+				-2.0
6,784	+				-2.7
6,784	+				-0.3
6,784	+				+0.7
6,785	-				-1.5
6,785	-				-0.9
6,822	+				-0.5
6,822	+				+0.1
6,823	-				+0.9
6,823	-				+0.6
6,823	-				-2.5
6,834	+				-0.2
6,834	+				-1.3
6,834	+				-0.3
6,834	+				+2.3
6,834	+				-0.1
6,835	-				-0.4
6,835	-				+0.5
6,842	+				-2.6
6,842	+				+0.7
6,843	-				-1.7
6,843	-				+1.0
6,843	-				-2.0
6,843	-				+0.8
6,863	-				+0.5
6,871	-				+0.1
6,878	+				-0.3
6,878	+				+1.0
6,897	-				+0.2
6,897	-				-2.4
6,897	-				-2.5
6,905	+				+0.4
6,913	+				-0.8
6,914	-				+0.6
6,914	-				-2.3
6,942	+				+1.0
7,011	+				+2.7
7,012	-				-0.8
7,012	-				-0.6
7,012	-				-0.3
7,032	+				+2.0
7,049	+				-0.8
7,050	-				+0.4
7,050	-				-1.7
7,191	+		IAI47_21360	0.17	+2.0
7,191	+		IAI47_21360	0.17	-0.7
7,192	-		IAI47_21360	0.17	-1.3
7,257	+		IAI47_21360	0.45	-0.1
7,258	-		IAI47_21360	0.45	-1.7
7,304	+		IAI47_21360	0.64	-1.7
7,304	+		IAI47_21360	0.64	+0.7
7,304	+		IAI47_21360	0.64	-1.7
7,304	+		IAI47_21360	0.64	+0.8
7,305	-		IAI47_21360	0.65	-0.9
7,305	-		IAI47_21360	0.65	-0.2
7,305	-		IAI47_21360	0.65	-0.5
7,305	-		IAI47_21360	0.65	-0.6
7,307	+		IAI47_21360	0.65	-0.4
7,307	+		IAI47_21360	0.65	-0.1
7,307	+		IAI47_21360	0.65	-0.9
7,308	-		IAI47_21360	0.66	+0.9
7,308	-		IAI47_21360	0.66	-1.7
7,322	-		IAI47_21360	0.72	-0.4
7,331	+		IAI47_21360	0.75	+2.1
7,331	+		IAI47_21360	0.75	-0.7
7,331	+		IAI47_21360	0.75	+0.3
7,331	+		IAI47_21360	0.75	-0.2
7,331	+		IAI47_21360	0.75	-0.3
7,331	+		IAI47_21360	0.75	-1.2
7,332	-		IAI47_21360	0.76	-0.1
7,332	-		IAI47_21360	0.76	-2.9
7,334	+		IAI47_21360	0.77	+1.4
7,334	+		IAI47_21360	0.77	-0.2
7,335	-		IAI47_21360	0.77	-1.9
7,335	-		IAI47_21360	0.77	-1.0
7,335	-		IAI47_21360	0.77	-0.9
7,335	-		IAI47_21360	0.77	-0.5
7,335	-		IAI47_21360	0.77	-2.4
7,337	+		IAI47_21360	0.78	-0.0
7,337	+		IAI47_21360	0.78	-0.7
7,338	-		IAI47_21360	0.78	-1.1
7,381	-				-0.0
7,381	-				-0.6
7,381	-				-0.6
7,408	+				+1.7
7,409	-				-1.2
7,409	-				-0.3
7,414	+				-0.8
7,415	-				+0.1
7,426	+				+0.7
7,426	+				-0.1
7,436	+				-0.6
7,436	+				-0.5
7,437	-				-0.9
7,437	-				-0.3
7,437	-				+0.8
7,441	+				+0.6
7,441	+				+0.9
7,441	+				-0.7
7,442	-				+0.1
7,442	-				+0.9
7,442	-				-0.5
7,490	+				+1.7
7,490	+				-2.0
7,490	+				-1.0
7,490	+				-1.4
7,490	+				+0.8
7,491	-				-1.0
7,494	+				+0.7
7,494	+				+0.9
7,495	-				+0.4
7,495	-				+0.2
7,558	+				+0.9
7,558	+				-0.6
7,564	+				-0.3
7,564	+				+1.0
7,564	+				+0.3
7,564	+				+0.0
7,564	+				-0.9
7,565	-				-0.2
7,565	-				-1.3
7,565	-				-0.7
7,565	-				+0.1
7,572	+				-0.1
7,572	+				+0.7
7,572	+				+1.1
7,573	-				-2.1
7,628	-		IAI47_21365	0.13	-0.2
7,639	+		IAI47_21365	0.15	+0.7
7,639	+		IAI47_21365	0.15	+1.1
7,639	+		IAI47_21365	0.15	+1.8
7,640	-		IAI47_21365	0.15	-1.8
7,640	-		IAI47_21365	0.15	-0.3
7,640	-		IAI47_21365	0.15	+0.1
7,640	-		IAI47_21365	0.15	-1.0
7,640	-		IAI47_21365	0.15	-1.6
7,640	-		IAI47_21365	0.15	+0.5
7,648	+		IAI47_21365	0.17	+2.4
7,648	+		IAI47_21365	0.17	-0.1
7,657	+		IAI47_21365	0.19	-1.4
7,658	-		IAI47_21365	0.19	-1.3
7,675	-		IAI47_21365	0.22	-0.4
7,691	+		IAI47_21365	0.26	+1.4
7,691	+		IAI47_21365	0.26	-0.4
7,691	+		IAI47_21365	0.26	-0.1
7,691	+		IAI47_21365	0.26	-0.7
7,692	-		IAI47_21365	0.26	+2.2
7,699	+		IAI47_21365	0.27	+1.4
7,699	+		IAI47_21365	0.27	+0.3
7,699	+		IAI47_21365	0.27	-0.7
7,699	+		IAI47_21365	0.27	-0.2
7,699	+		IAI47_21365	0.27	+1.0
7,700	-		IAI47_21365	0.28	-0.9
7,700	-		IAI47_21365	0.28	+1.3
7,700	-		IAI47_21365	0.28	+0.1
7,700	-		IAI47_21365	0.28	+0.7
7,721	+		IAI47_21365	0.32	+1.9
7,776	+		IAI47_21365	0.43	-0.8
7,776	+		IAI47_21365	0.43	+0.6
7,777	-		IAI47_21365	0.43	-1.8
7,777	-		IAI47_21365	0.43	+0.6
7,922	-		IAI47_21365	0.73	+0.4
7,922	-		IAI47_21365	0.73	+0.7
7,922	-		IAI47_21365	0.73	-0.6
7,922	-		IAI47_21365	0.73	-1.4
7,923	+		IAI47_21365	0.73	+1.7
7,923	+		IAI47_21365	0.73	+0.7
7,923	+		IAI47_21365	0.73	+0.7
7,923	+		IAI47_21365	0.73	-0.6
7,923	+		IAI47_21365	0.73	-0.5
7,923	+		IAI47_21365	0.73	+1.4
7,923	+		IAI47_21365	0.73	+0.7
7,923	+		IAI47_21365	0.73	+1.1
7,923	+		IAI47_21365	0.73	-0.8
7,924	-		IAI47_21365	0.73	-1.4
7,924	-		IAI47_21365	0.73	-0.1
7,924	-		IAI47_21365	0.73	-0.6
7,924	-		IAI47_21365	0.73	-0.4
7,924	-		IAI47_21365	0.73	+0.7
7,924	-		IAI47_21365	0.73	-0.2
7,983	+		IAI47_21365	0.85	-0.4
7,983	+		IAI47_21365	0.85	+1.0
7,984	-		IAI47_21365	0.86	+0.3
8,008	+				-0.3
8,009	-				-0.4
8,035	+				+0.2
8,035	+				-0.4
8,035	+				+0.3
8,051	+				-0.2
8,051	+				+1.3
8,051	+				-0.5
8,051	+				-2.8
8,052	-				+0.5
8,052	-				+0.6
8,052	-				-0.2
8,052	-				-0.9
8,052	-				-1.5
8,054	+				+2.1
8,055	-				+0.8
8,055	-				-1.5
8,055	-				+1.4
8,094	+				-1.2
8,094	+				+0.3
8,094	+				-1.1
8,142	+				+0.2
8,142	+				-1.0
8,143	-				-0.8
8,143	-				-1.3
8,143	-				-0.5
8,143	-				-0.2
8,148	+				-0.1
8,148	+				-0.0
8,149	-				-0.5
8,149	-				-0.1
8,149	-				-0.3
8,149	-				+1.4
8,172	+				-0.6
8,217	+		IAI47_21370	0.12	+1.1
8,218	-		IAI47_21370	0.12	-0.2
8,218	-		IAI47_21370	0.12	+0.8
8,218	-		IAI47_21370	0.12	+0.8
8,218	-		IAI47_21370	0.12	+1.1
8,241	+		IAI47_21370	0.15	-1.0
8,242	-		IAI47_21370	0.15	-0.1
8,242	-		IAI47_21370	0.15	-1.2
8,346	+		IAI47_21370	0.29	+2.3
8,347	-		IAI47_21370	0.29	+2.1
8,347	-		IAI47_21370	0.29	+0.1
8,386	-		IAI47_21370	0.34	+0.4