Strain Fitness in Pantoea sp. MT58 around IAI47_11055

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50
2,328,810	+		IAI47_11050	0.28	+1.0
2,328,810	+		IAI47_11050	0.28	-0.5
2,328,856	+		IAI47_11050	0.31	+0.6
2,328,857	-		IAI47_11050	0.32	-1.1
2,328,857	-		IAI47_11050	0.32	-0.7
2,328,857	-		IAI47_11050	0.32	-0.3
2,328,860	+		IAI47_11050	0.32	+0.3
2,328,860	+		IAI47_11050	0.32	+1.9
2,328,860	+		IAI47_11050	0.32	+0.7
2,328,860	+		IAI47_11050	0.32	-0.6
2,328,860	+		IAI47_11050	0.32	-1.7
2,328,860	+		IAI47_11050	0.32	+0.6
2,328,860	+		IAI47_11050	0.32	+0.5
2,328,860	+		IAI47_11050	0.32	+0.0
2,328,860	+		IAI47_11050	0.32	+0.1
2,328,860	+		IAI47_11050	0.32	-0.1
2,328,861	-		IAI47_11050	0.32	+0.0
2,328,861	-		IAI47_11050	0.32	-1.4
2,328,861	-		IAI47_11050	0.32	+1.3
2,328,861	-		IAI47_11050	0.32	+0.2
2,328,861	-		IAI47_11050	0.32	-1.1
2,328,861	-		IAI47_11050	0.32	-0.8
2,328,861	-		IAI47_11050	0.32	-0.2
2,328,861	-		IAI47_11050	0.32	-0.5
2,328,861	-		IAI47_11050	0.32	+0.3
2,328,861	-		IAI47_11050	0.32	-1.5
2,328,861	-		IAI47_11050	0.32	+1.2
2,328,861	-		IAI47_11050	0.32	-1.1
2,328,861	-		IAI47_11050	0.32	-0.3
2,328,861	-		IAI47_11050	0.32	-1.0
2,328,861	-		IAI47_11050	0.32	-0.9
2,328,960	+		IAI47_11050	0.40	-0.8
2,328,960	+		IAI47_11050	0.40	-0.3
2,328,987	+		IAI47_11050	0.43	+1.2
2,329,089	-		IAI47_11050	0.51	+1.1
2,329,126	+		IAI47_11050	0.54	+0.9
2,329,127	-		IAI47_11050	0.54	+0.4
2,329,153	+		IAI47_11050	0.56	+2.0
2,329,153	+		IAI47_11050	0.56	+2.3
2,329,153	+		IAI47_11050	0.56	+0.1
2,329,153	+		IAI47_11050	0.56	-2.0
2,329,154	-		IAI47_11050	0.57	-1.6
2,329,154	-		IAI47_11050	0.57	-1.0
2,329,154	-		IAI47_11050	0.57	-2.0
2,329,175	+		IAI47_11050	0.58	-0.3
2,329,176	-		IAI47_11050	0.58	+1.4
2,329,176	-		IAI47_11050	0.58	+0.3
2,329,176	-		IAI47_11050	0.58	+1.5
2,329,177	+		IAI47_11050	0.59	+1.0
2,329,177	+		IAI47_11050	0.59	+1.9
2,329,211	+		IAI47_11050	0.61	-0.1
2,329,211	+		IAI47_11050	0.61	+1.3
2,329,212	-		IAI47_11050	0.61	-3.2
2,329,234	+		IAI47_11050	0.63	-0.2
2,329,234	+		IAI47_11050	0.63	-0.3
2,329,235	-		IAI47_11050	0.63	-0.1
2,329,235	-		IAI47_11050	0.63	-1.8
2,329,235	-		IAI47_11050	0.63	+0.2
2,329,360	+		IAI47_11050	0.74	+1.0
2,329,361	-		IAI47_11050	0.74	-0.6
2,329,386	+		IAI47_11050	0.76	-0.1
2,329,426	+		IAI47_11050	0.79	-1.9
2,329,426	+		IAI47_11050	0.79	+2.3
2,329,427	-		IAI47_11050	0.80	+0.7
2,329,427	-		IAI47_11050	0.80	-1.8
2,329,453	+		IAI47_11050	0.82	+1.2
2,329,454	-		IAI47_11050	0.82	-1.1
2,329,584	+				-0.2
2,329,618	+				-1.2
2,329,618	+				+0.9
2,329,619	-				-0.1
2,329,619	-				+0.3
2,329,619	-				+1.0
2,329,619	-				-0.4
2,329,619	-				+0.8
2,329,639	+				-0.5
2,329,667	+				+0.4
2,329,667	+				+0.9
2,329,697	+				+1.4
2,329,718	+				-0.5
2,329,718	+				+0.3
2,329,719	-				-1.9
2,329,719	-				-0.1
2,329,719	-				+1.6
2,329,747	-				-1.0
2,329,747	-				+0.7
2,329,752	+				+1.3
2,329,752	+				+0.9
2,330,625	+				+0.7
2,330,625	+				+0.0
2,330,626	-				-1.5
2,330,712	-				-1.3
2,330,726	+				+0.3
2,330,814	+		IAI47_11060	0.14	+0.8
2,330,815	-		IAI47_11060	0.14	-0.3
2,330,883	+		IAI47_11060	0.22	+1.3
2,330,883	+		IAI47_11060	0.22	-0.2
2,330,884	-		IAI47_11060	0.22	-0.1
2,330,884	-		IAI47_11060	0.22	+0.5
2,330,884	-		IAI47_11060	0.22	+1.5
2,330,916	+		IAI47_11060	0.26	-0.4
2,330,917	-		IAI47_11060	0.26	+0.7
2,330,991	+		IAI47_11060	0.34	+0.3
2,330,991	+		IAI47_11060	0.34	-0.3
2,330,991	+		IAI47_11060	0.34	-0.4
2,330,991	+		IAI47_11060	0.34	+1.9
2,330,992	-		IAI47_11060	0.34	-1.6
2,330,992	-		IAI47_11060	0.34	+1.1
2,330,992	-		IAI47_11060	0.34	+0.3
2,331,133	+		IAI47_11060	0.50	+0.6
2,331,133	+		IAI47_11060	0.50	-0.6
2,331,134	-		IAI47_11060	0.50	+0.3
2,331,134	-		IAI47_11060	0.50	+0.1
2,331,146	+		IAI47_11060	0.51	-0.7
2,331,146	+		IAI47_11060	0.51	+0.3
2,331,146	+		IAI47_11060	0.51	+0.9
2,331,146	+		IAI47_11060	0.51	-0.4
2,331,146	+		IAI47_11060	0.51	+0.0
2,331,146	+		IAI47_11060	0.51	+1.2
2,331,146	+		IAI47_11060	0.51	-0.1
2,331,147	-		IAI47_11060	0.52	+0.8
2,331,147	-		IAI47_11060	0.52	+0.4
2,331,147	-		IAI47_11060	0.52	+2.0
2,331,148	+		IAI47_11060	0.52	+1.2
2,331,149	-		IAI47_11060	0.52	-0.7
2,331,149	-		IAI47_11060	0.52	-0.3
2,331,149	-		IAI47_11060	0.52	+1.0
2,331,149	-		IAI47_11060	0.52	-0.3
2,331,169	-		IAI47_11060	0.54	+0.3
2,331,169	-		IAI47_11060	0.54	-1.5
2,331,208	-		IAI47_11060	0.58	-0.6
2,331,218	+		IAI47_11060	0.59	+0.9
2,331,219	-		IAI47_11060	0.60	+0.5
2,331,263	+		IAI47_11060	0.65	+1.4
2,331,264	-		IAI47_11060	0.65	+0.4
2,331,266	-		IAI47_11060	0.65	+0.0
2,331,266	-		IAI47_11060	0.65	+1.2
2,331,294	+		IAI47_11060	0.68	-0.1
2,331,294	+		IAI47_11060	0.68	+3.9
2,331,295	-		IAI47_11060	0.68	+1.4
2,331,295	-		IAI47_11060	0.68	-1.6
2,331,295	-		IAI47_11060	0.68	+0.2
2,331,337	+		IAI47_11060	0.73	+0.7
2,331,344	-		IAI47_11060	0.74	-0.3
2,331,445	-		IAI47_11060	0.85	+1.5
2,331,445	-		IAI47_11060	0.85	-0.5
2,331,445	-		IAI47_11060	0.85	-0.3
2,331,533	+				-1.1
2,331,533	+				-0.6
2,331,533	+				+0.4
2,331,533	+				+0.0
2,331,534	-				+0.1
2,331,534	-				+0.5
2,331,534	-				-0.7
2,331,576	+				+0.3
2,331,610	+				-0.1
2,331,610	+				-0.6
2,331,610	+				+0.3
2,331,611	-				-1.6
2,331,618	-				+0.4