Strain Fitness in Pantoea sp. MT58 around IAI47_10575

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50
2,236,303	+		IAI47_10570	0.42	+0.6
2,236,304	-		IAI47_10570	0.42	-0.7
2,236,334	+		IAI47_10570	0.44	+1.1
2,236,335	-		IAI47_10570	0.44	+0.1
2,236,335	-		IAI47_10570	0.44	+1.7
2,236,360	+		IAI47_10570	0.46	-1.4
2,236,360	+		IAI47_10570	0.46	-1.0
2,236,360	+		IAI47_10570	0.46	-0.1
2,236,361	-		IAI47_10570	0.47	-0.0
2,236,361	-		IAI47_10570	0.47	-0.2
2,236,361	-		IAI47_10570	0.47	-0.6
2,236,370	-		IAI47_10570	0.47	+0.3
2,236,442	+		IAI47_10570	0.53	+1.6
2,236,606	+		IAI47_10570	0.66	+0.8
2,236,630	+		IAI47_10570	0.68	-0.3
2,236,631	-		IAI47_10570	0.68	-0.5
2,236,631	-		IAI47_10570	0.68	+0.1
2,236,631	-		IAI47_10570	0.68	-0.9
2,236,633	+		IAI47_10570	0.68	+0.9
2,236,633	+		IAI47_10570	0.68	-0.0
2,236,633	+		IAI47_10570	0.68	+0.6
2,236,634	-		IAI47_10570	0.68	+0.7
2,236,634	-		IAI47_10570	0.68	+0.8
2,236,662	-		IAI47_10570	0.71	-0.0
2,236,684	+		IAI47_10570	0.72	-0.0
2,236,746	-		IAI47_10570	0.77	+1.0
2,236,799	+		IAI47_10570	0.82	+1.8
2,236,799	+		IAI47_10570	0.82	-0.3
2,236,799	+		IAI47_10570	0.82	+0.9
2,236,799	+		IAI47_10570	0.82	-0.5
2,236,800	-		IAI47_10570	0.82	-0.4
2,236,833	+		IAI47_10570	0.84	-0.1
2,236,843	-		IAI47_10570	0.85	+0.4
2,236,869	-		IAI47_10570	0.87	+0.5
2,236,888	-		IAI47_10570	0.89	-1.0
2,236,888	-		IAI47_10570	0.89	+0.2
2,236,888	-		IAI47_10570	0.89	-0.9
2,236,888	-		IAI47_10570	0.89	+0.0
2,236,888	-		IAI47_10570	0.89	+0.4
2,236,897	-		IAI47_10570	0.89	+0.8
2,236,937	+				-0.3
2,236,937	+				+0.5
2,236,959	-				+0.0
2,237,005	+				-1.2
2,237,005	+				-0.2
2,237,011	+				+0.3
2,237,011	+				+0.8
2,237,012	-				-1.0
2,237,012	-				-1.2
2,237,047	+				-0.6
2,237,047	+				+1.8
2,237,048	-				-1.0
2,237,051	+				-0.9
2,237,051	+				+0.3
2,237,079	+				+0.5
2,237,107	+				-0.2
2,237,131	-				+0.2
2,237,131	-				-0.5
2,237,161	+				-0.1
2,237,173	+				-0.7
2,237,213	+				-0.4
2,237,215	+				-1.2
2,237,216	-				-1.0
2,237,216	-				-1.2
2,237,216	-				-2.0
2,237,216	-				-0.6
2,237,235	-				-1.0
2,237,272	-				+0.9
2,237,274	+				+0.3
2,237,275	-				+0.4
2,237,282	+				+0.3
2,237,283	-				-0.7
2,237,283	-				-0.9
2,237,285	-				+0.3
2,237,319	+		IAI47_10575	0.15	-1.6
2,237,329	+		IAI47_10575	0.20	+0.3
2,237,329	+		IAI47_10575	0.20	-2.2
2,237,330	-		IAI47_10575	0.20	+0.5
2,237,345	+		IAI47_10575	0.27	-0.9
2,237,345	+		IAI47_10575	0.27	+1.6
2,237,346	-		IAI47_10575	0.28	-0.3
2,237,421	+		IAI47_10575	0.63	-0.9
2,237,422	-		IAI47_10575	0.63	-1.2
2,237,443	-		IAI47_10575	0.73	+0.7
2,237,467	-		IAI47_10575	0.85	-1.0
2,237,564	-				+0.6
2,237,579	+				-0.3
2,237,579	+				+0.5
2,237,599	-				+1.3
2,237,621	+				+0.1
2,237,622	-				+1.5
2,237,701	-				-0.3
2,237,755	+				-1.5
2,237,924	+		IAI47_10580	0.16	+0.3
2,237,924	+		IAI47_10580	0.16	-0.4
2,237,925	-		IAI47_10580	0.16	-0.1
2,237,926	+		IAI47_10580	0.16	-1.7
2,237,926	+		IAI47_10580	0.16	-0.7
2,237,926	+		IAI47_10580	0.16	+2.4
2,237,926	+		IAI47_10580	0.16	+1.0
2,237,926	+		IAI47_10580	0.16	+1.0
2,237,926	+		IAI47_10580	0.16	-0.4
2,237,927	-		IAI47_10580	0.16	-0.6
2,237,927	-		IAI47_10580	0.16	-2.3
2,237,927	-		IAI47_10580	0.16	-0.2
2,237,927	-		IAI47_10580	0.16	-0.6
2,237,930	+		IAI47_10580	0.17	-0.3
2,237,931	-		IAI47_10580	0.17	-2.0
2,237,931	-		IAI47_10580	0.17	+0.8
2,237,931	-		IAI47_10580	0.17	+0.1
2,237,931	-		IAI47_10580	0.17	+0.3
2,237,945	+		IAI47_10580	0.19	-0.0
2,237,945	+		IAI47_10580	0.19	+0.2
2,237,991	-		IAI47_10580	0.24	-1.4
2,238,020	+		IAI47_10580	0.27	-1.0
2,238,021	-		IAI47_10580	0.27	+0.2
2,238,053	+		IAI47_10580	0.31	+1.3
2,238,053	+		IAI47_10580	0.31	-1.1
2,238,054	-		IAI47_10580	0.31	+0.3
2,238,101	-		IAI47_10580	0.36	-0.8
2,238,101	-		IAI47_10580	0.36	+0.6
2,238,101	-		IAI47_10580	0.36	+1.1
2,238,137	+		IAI47_10580	0.40	-1.8
2,238,151	+		IAI47_10580	0.42	-0.5
2,238,152	-		IAI47_10580	0.42	+0.2
2,238,163	+		IAI47_10580	0.43	-0.0
2,238,163	+		IAI47_10580	0.43	+1.6
2,238,164	-		IAI47_10580	0.43	-0.0
2,238,164	-		IAI47_10580	0.43	-0.3
2,238,176	+		IAI47_10580	0.45	-0.5
2,238,183	+		IAI47_10580	0.45	+0.3
2,238,184	-		IAI47_10580	0.46	-0.6
2,238,184	-		IAI47_10580	0.46	-0.9
2,238,184	-		IAI47_10580	0.46	+0.0
2,238,189	-		IAI47_10580	0.46	+1.1
2,238,197	+		IAI47_10580	0.47	+2.0
2,238,197	+		IAI47_10580	0.47	+2.8
2,238,198	-		IAI47_10580	0.47	-1.2
2,238,199	+		IAI47_10580	0.47	-0.5
2,238,199	+		IAI47_10580	0.47	+0.3
2,238,199	+		IAI47_10580	0.47	+1.4
2,238,199	+		IAI47_10580	0.47	+0.9
2,238,199	+		IAI47_10580	0.47	-0.5
2,238,200	-		IAI47_10580	0.47	-0.9
2,238,200	-		IAI47_10580	0.47	-0.1
2,238,235	+		IAI47_10580	0.51	+1.3
2,238,235	+		IAI47_10580	0.51	+0.5
2,238,235	+		IAI47_10580	0.51	-1.2
2,238,236	-		IAI47_10580	0.51	+0.1
2,238,238	+		IAI47_10580	0.52	+2.0
2,238,238	+		IAI47_10580	0.52	-0.9
2,238,238	+		IAI47_10580	0.52	+0.1
2,238,238	+		IAI47_10580	0.52	+0.8
2,238,239	-		IAI47_10580	0.52	+1.0
2,238,239	-		IAI47_10580	0.52	+0.0
2,238,242	+		IAI47_10580	0.52	-1.0
2,238,242	+		IAI47_10580	0.52	-1.1
2,238,242	+		IAI47_10580	0.52	+1.0
2,238,243	-		IAI47_10580	0.52	-2.1
2,238,251	-		IAI47_10580	0.53	-0.5
2,238,251	-		IAI47_10580	0.53	-1.6
2,238,263	+		IAI47_10580	0.54	-0.7
2,238,264	-		IAI47_10580	0.55	-0.1
2,238,273	+		IAI47_10580	0.56	+0.0
2,238,273	+		IAI47_10580	0.56	+0.0
2,238,274	-		IAI47_10580	0.56	-1.5
2,238,288	+		IAI47_10580	0.57	+1.3
2,238,404	-		IAI47_10580	0.70	+0.3
2,238,404	-		IAI47_10580	0.70	+1.8
2,238,431	+		IAI47_10580	0.73	-0.0
2,238,431	+		IAI47_10580	0.73	-1.3
2,238,432	-		IAI47_10580	0.74	-0.4
2,238,432	-		IAI47_10580	0.74	-0.6
2,238,432	-		IAI47_10580	0.74	-1.5
2,238,434	+		IAI47_10580	0.74	-1.1
2,238,434	+		IAI47_10580	0.74	+1.0
2,238,435	-		IAI47_10580	0.74	-0.1
2,238,435	-		IAI47_10580	0.74	-0.5
2,238,435	-		IAI47_10580	0.74	+0.1
2,238,461	+		IAI47_10580	0.77	+1.2
2,238,461	+		IAI47_10580	0.77	+0.7
2,238,461	+		IAI47_10580	0.77	-0.7
2,238,461	+		IAI47_10580	0.77	-0.1
2,238,462	-		IAI47_10580	0.77	+1.5