Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c29720

Experiment: m.b. Phosphomycin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Phosphomycin 1 mg/ml
3,108,048	+		PGA1_c29710	0.18	+0.3
3,108,051	-		PGA1_c29710	0.19	-0.6
3,108,056	-		PGA1_c29710	0.19	-0.2
3,108,056	-		PGA1_c29710	0.19	-0.9
3,108,153	-		PGA1_c29710	0.28	-0.4
3,108,153	-		PGA1_c29710	0.28	-0.8
3,108,173	-		PGA1_c29710	0.30	-0.9
3,108,207	+		PGA1_c29710	0.33	+0.2
3,108,212	+		PGA1_c29710	0.33	-1.4
3,108,212	+		PGA1_c29710	0.33	+1.4
3,108,212	+		PGA1_c29710	0.33	+1.3
3,108,212	+		PGA1_c29710	0.33	+0.5
3,108,212	+		PGA1_c29710	0.33	-0.6
3,108,212	+		PGA1_c29710	0.33	+0.3
3,108,212	+		PGA1_c29710	0.33	+1.6
3,108,212	+		PGA1_c29710	0.33	-2.1
3,108,220	-		PGA1_c29710	0.34	+0.1
3,108,220	-		PGA1_c29710	0.34	-0.4
3,108,220	-		PGA1_c29710	0.34	-0.4
3,108,220	-		PGA1_c29710	0.34	-0.1
3,108,220	-		PGA1_c29710	0.34	-0.8
3,108,230	-		PGA1_c29710	0.35	+0.0
3,108,255	-		PGA1_c29710	0.37	+0.1
3,108,257	+		PGA1_c29710	0.37	+0.8
3,108,288	-		PGA1_c29710	0.40	+0.0
3,108,332	-		PGA1_c29710	0.44	+0.4
3,108,332	-		PGA1_c29710	0.44	-0.5
3,108,390	+		PGA1_c29710	0.49	-0.2
3,108,398	-		PGA1_c29710	0.50	-0.4
3,108,398	-		PGA1_c29710	0.50	+0.0
3,108,398	-		PGA1_c29710	0.50	-0.3
3,108,418	-		PGA1_c29710	0.52	-0.7
3,108,446	+		PGA1_c29710	0.54	-0.1
3,108,509	+		PGA1_c29710	0.60	-0.3
3,108,517	-		PGA1_c29710	0.61	+1.4
3,108,552	-		PGA1_c29710	0.64	-0.6
3,108,562	-		PGA1_c29710	0.65	+0.5
3,108,568	-		PGA1_c29710	0.65	-0.1
3,108,715	-		PGA1_c29710	0.79	-1.2
3,108,715	-		PGA1_c29710	0.79	-0.5
3,108,715	-		PGA1_c29710	0.79	+1.7
3,108,801	-		PGA1_c29710	0.87	+0.0
3,108,809	+		PGA1_c29710	0.87	+0.6
3,108,827	-		PGA1_c29710	0.89	+0.7
3,108,858	-				-0.0
3,108,915	-				-0.5
3,108,928	+				+0.9
3,108,936	-				-0.0
3,108,941	+				+0.1
3,108,941	+				+0.5
3,108,943	+				+1.5
3,108,956	-				+1.3
3,108,956	-				+0.7
3,108,956	-				-0.2
3,108,976	-				+0.3
3,108,997	+				-0.4
3,109,005	-				-0.4
3,109,030	+				+1.0
3,109,166	+				+0.2
3,109,209	+		PGA1_c29720	0.12	-0.7
3,109,233	+		PGA1_c29720	0.14	-1.2
3,109,233	+		PGA1_c29720	0.14	+0.7
3,109,241	-		PGA1_c29720	0.14	-0.0
3,109,268	+		PGA1_c29720	0.16	+0.3
3,109,319	-		PGA1_c29720	0.20	-0.7
3,109,394	-		PGA1_c29720	0.25	-1.4
3,109,401	+		PGA1_c29720	0.25	+0.0
3,109,409	-		PGA1_c29720	0.26	-0.9
3,109,409	-		PGA1_c29720	0.26	-0.5
3,109,425	+		PGA1_c29720	0.27	-0.1
3,109,433	-		PGA1_c29720	0.28	+0.1
3,109,433	-		PGA1_c29720	0.28	-0.7
3,109,452	-		PGA1_c29720	0.29	-0.6
3,109,498	+		PGA1_c29720	0.32	-0.8
3,109,501	-		PGA1_c29720	0.32	-0.1
3,109,509	+		PGA1_c29720	0.33	+1.1
3,109,520	-		PGA1_c29720	0.34	+0.1
3,109,606	+		PGA1_c29720	0.40	-0.4
3,109,624	+		PGA1_c29720	0.41	+0.5
3,109,657	+		PGA1_c29720	0.43	+0.8
3,109,667	+		PGA1_c29720	0.44	-0.6
3,109,682	-		PGA1_c29720	0.45	+0.7
3,109,717	-		PGA1_c29720	0.47	+0.3
3,109,805	-		PGA1_c29720	0.53	-0.5
3,109,825	+		PGA1_c29720	0.55	-0.7
3,109,829	-		PGA1_c29720	0.55	+0.7
3,109,838	+		PGA1_c29720	0.56	-0.0
3,109,846	-		PGA1_c29720	0.56	+0.1
3,109,872	-		PGA1_c29720	0.58	+0.5
3,109,927	+		PGA1_c29720	0.62	+0.0
3,109,997	-		PGA1_c29720	0.67	-1.0
3,110,030	+		PGA1_c29720	0.69	+1.0
3,110,035	+		PGA1_c29720	0.69	+0.7
3,110,079	+		PGA1_c29720	0.72	+0.5
3,110,087	-		PGA1_c29720	0.73	+0.9
3,110,165	-		PGA1_c29720	0.78	-2.0
3,110,170	-		PGA1_c29720	0.78	-0.2
3,110,185	-		PGA1_c29720	0.80	-1.6
3,110,303	-		PGA1_c29720	0.88	-0.1
3,110,399	+				-0.6
3,110,478	+				+0.3
3,110,478	+				+0.5
3,110,478	+				+0.0
3,110,478	+				+1.6
3,110,486	-				-0.1
3,110,491	-				+0.0
3,110,491	-				+0.6
3,110,491	-				+0.8
3,110,524	-				-0.9
3,110,570	+				+0.8
3,110,570	+				+0.5
3,110,570	+				-0.2
3,110,578	-				+1.0
3,110,578	-				+0.3
3,110,598	+				+1.3
3,110,606	-				+0.6
3,110,653	-		PGA1_c29730	0.11	+0.4
3,110,704	-		PGA1_c29730	0.17	+0.7
3,110,751	-		PGA1_c29730	0.24	+0.0
3,110,843	+		PGA1_c29730	0.36	+0.3
3,110,851	-		PGA1_c29730	0.37	+0.3
3,110,851	-		PGA1_c29730	0.37	+0.9
3,110,851	-		PGA1_c29730	0.37	+0.4
3,110,851	-		PGA1_c29730	0.37	+0.3
3,110,898	-		PGA1_c29730	0.43	+0.4
3,110,898	-		PGA1_c29730	0.43	+0.3
3,110,922	-		PGA1_c29730	0.46	+1.5
3,110,991	+		PGA1_c29730	0.55	-0.6
3,111,008	+		PGA1_c29730	0.57	-1.5
3,111,030	+		PGA1_c29730	0.60	+0.1
3,111,030	+		PGA1_c29730	0.60	+0.0
3,111,038	-		PGA1_c29730	0.61	-0.0
3,111,038	-		PGA1_c29730	0.61	+0.9
3,111,038	-		PGA1_c29730	0.61	+0.0
3,111,106	+		PGA1_c29730	0.70	-1.5
3,111,188	-		PGA1_c29730	0.81	-0.2
3,111,193	+		PGA1_c29730	0.82	+0.0
3,111,200	+		PGA1_c29730	0.83	+0.6
3,111,201	-		PGA1_c29730	0.83	+0.9
3,111,208	-		PGA1_c29730	0.84	-0.6
3,111,245	+		PGA1_c29730	0.89	-0.3
3,111,263	-				+1.3
3,111,346	+				-1.4
3,111,351	+				+1.5
3,111,353	+				-0.2
3,111,353	+				+0.1
3,111,353	+				+1.6
3,111,353	+				+0.2
3,111,366	-				-1.1
3,111,410	+		PGA1_c29740	0.12	-0.3
3,111,463	+		PGA1_c29740	0.26	-1.9