Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS27505

Experiment: A22 0.1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS27500 and BWI76_RS27505 are separated by 150 nucleotidesBWI76_RS27505 and BWI76_RS27510 are separated by 448 nucleotides BWI76_RS27500: BWI76_RS27500 - sulfate transporter subunit, at 5,705,614 to 5,706,603 _RS27500 BWI76_RS27505: BWI76_RS27505 - septal ring assembly protein ZapB, at 5,706,754 to 5,706,993 _RS27505 BWI76_RS27510: BWI76_RS27510 - aquaporin, at 5,707,442 to 5,708,293 _RS27510 Position (kb) 5706 5707Strain fitness (log2 ratio) -2 -1 0 1 2 3at 5705.755 kb on - strand, within BWI76_RS27500at 5705.771 kb on - strand, within BWI76_RS27500at 5705.788 kb on + strand, within BWI76_RS27500at 5705.812 kb on - strand, within BWI76_RS27500at 5706.053 kb on + strand, within BWI76_RS27500at 5706.122 kb on - strand, within BWI76_RS27500at 5706.273 kb on - strand, within BWI76_RS27500at 5706.354 kb on + strand, within BWI76_RS27500at 5706.354 kb on + strand, within BWI76_RS27500at 5706.361 kb on + strand, within BWI76_RS27500at 5706.362 kb on - strand, within BWI76_RS27500at 5706.584 kb on - strandat 5706.585 kb on - strandat 5706.585 kb on - strandat 5706.603 kb on + strandat 5706.624 kb on + strandat 5706.635 kb on + strandat 5706.712 kb on + strandat 5706.717 kb on + strandat 5706.772 kb on + strandat 5706.780 kb on - strand, within BWI76_RS27505at 5706.810 kb on - strand, within BWI76_RS27505at 5706.866 kb on - strand, within BWI76_RS27505at 5706.930 kb on - strand, within BWI76_RS27505at 5706.989 kb on - strandat 5706.994 kb on + strandat 5706.994 kb on + strandat 5707.012 kb on - strandat 5707.087 kb on - strandat 5707.092 kb on - strandat 5707.534 kb on + strand, within BWI76_RS27510at 5707.625 kb on - strand, within BWI76_RS27510at 5707.647 kb on - strand, within BWI76_RS27510at 5707.656 kb on + strand, within BWI76_RS27510at 5707.711 kb on - strand, within BWI76_RS27510at 5707.793 kb on + strand, within BWI76_RS27510

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Per-strain Table

Position Strand Gene LocusTag Fraction A22 0.1 mg/ml
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5,705,755 - BWI76_RS27500 0.14 -0.4
5,705,771 - BWI76_RS27500 0.16 -0.8
5,705,788 + BWI76_RS27500 0.18 +0.1
5,705,812 - BWI76_RS27500 0.20 +1.3
5,706,053 + BWI76_RS27500 0.44 +0.8
5,706,122 - BWI76_RS27500 0.51 -1.7
5,706,273 - BWI76_RS27500 0.67 +0.1
5,706,354 + BWI76_RS27500 0.75 -1.4
5,706,354 + BWI76_RS27500 0.75 -0.3
5,706,361 + BWI76_RS27500 0.75 -0.7
5,706,362 - BWI76_RS27500 0.76 -0.2
5,706,584 - +1.0
5,706,585 - -1.1
5,706,585 - +0.2
5,706,603 + -0.2
5,706,624 + -0.9
5,706,635 + +0.1
5,706,712 + +0.0
5,706,717 + -0.6
5,706,772 + -0.3
5,706,780 - BWI76_RS27505 0.11 -1.6
5,706,810 - BWI76_RS27505 0.23 -2.4
5,706,866 - BWI76_RS27505 0.47 -0.2
5,706,930 - BWI76_RS27505 0.73 -0.6
5,706,989 - +1.2
5,706,994 + +0.2
5,706,994 + -0.7
5,707,012 - -0.4
5,707,087 - -0.1
5,707,092 - +2.0
5,707,534 + BWI76_RS27510 0.11 -0.1
5,707,625 - BWI76_RS27510 0.21 +3.4
5,707,647 - BWI76_RS27510 0.24 -1.4
5,707,656 + BWI76_RS27510 0.25 +0.5
5,707,711 - BWI76_RS27510 0.32 -1.1
5,707,793 + BWI76_RS27510 0.41 +1.0

Or see this region's nucleotide sequence