Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS26470

Experiment: A22 0.1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS26465 and BWI76_RS26470 overlap by 1 nucleotidesBWI76_RS26470 and BWI76_RS26475 overlap by 4 nucleotides BWI76_RS26465: BWI76_RS26465 - 4-amino-4-deoxy-L-arabinose lipid A transferase, at 5,476,074 to 5,477,729 _RS26465 BWI76_RS26470: BWI76_RS26470 - 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase, at 5,477,729 to 5,478,631 _RS26470 BWI76_RS26475: BWI76_RS26475 - bifunctional UDP-glucuronic acid oxidase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase, at 5,478,628 to 5,480,613 _RS26475 Position (kb) 5477 5478 5479Strain fitness (log2 ratio) -2 -1 0 1at 5476.740 kb on - strand, within BWI76_RS26465at 5476.771 kb on - strand, within BWI76_RS26465at 5476.792 kb on + strand, within BWI76_RS26465at 5476.794 kb on - strand, within BWI76_RS26465at 5476.843 kb on + strand, within BWI76_RS26465at 5476.843 kb on + strand, within BWI76_RS26465at 5477.022 kb on - strand, within BWI76_RS26465at 5477.153 kb on + strand, within BWI76_RS26465at 5477.166 kb on - strand, within BWI76_RS26465at 5477.226 kb on + strand, within BWI76_RS26465at 5477.453 kb on + strand, within BWI76_RS26465at 5477.508 kb on + strand, within BWI76_RS26465at 5477.639 kb on - strandat 5477.842 kb on + strand, within BWI76_RS26470at 5477.890 kb on - strand, within BWI76_RS26470at 5477.890 kb on - strand, within BWI76_RS26470at 5477.940 kb on + strand, within BWI76_RS26470at 5477.948 kb on - strand, within BWI76_RS26470at 5478.061 kb on - strand, within BWI76_RS26470at 5478.102 kb on - strand, within BWI76_RS26470at 5478.282 kb on + strand, within BWI76_RS26470at 5478.498 kb on + strand, within BWI76_RS26470at 5478.649 kb on + strandat 5478.673 kb on + strandat 5478.684 kb on + strandat 5478.753 kb on + strandat 5478.809 kb on - strandat 5478.855 kb on + strand, within BWI76_RS26475at 5478.963 kb on - strandat 5479.037 kb on - strand, within BWI76_RS26475at 5479.057 kb on - strand, within BWI76_RS26475at 5479.171 kb on + strand, within BWI76_RS26475at 5479.229 kb on + strand, within BWI76_RS26475at 5479.263 kb on + strand, within BWI76_RS26475at 5479.375 kb on - strand, within BWI76_RS26475at 5479.439 kb on + strand, within BWI76_RS26475at 5479.476 kb on - strand, within BWI76_RS26475at 5479.501 kb on + strand, within BWI76_RS26475at 5479.580 kb on - strand, within BWI76_RS26475

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Per-strain Table

Position Strand Gene LocusTag Fraction A22 0.1 mg/ml
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5,476,740 - BWI76_RS26465 0.40 -0.1
5,476,771 - BWI76_RS26465 0.42 -0.3
5,476,792 + BWI76_RS26465 0.43 +0.7
5,476,794 - BWI76_RS26465 0.43 +0.2
5,476,843 + BWI76_RS26465 0.46 +0.4
5,476,843 + BWI76_RS26465 0.46 +0.2
5,477,022 - BWI76_RS26465 0.57 +0.3
5,477,153 + BWI76_RS26465 0.65 -0.3
5,477,166 - BWI76_RS26465 0.66 +0.9
5,477,226 + BWI76_RS26465 0.70 +0.4
5,477,453 + BWI76_RS26465 0.83 +0.1
5,477,508 + BWI76_RS26465 0.87 +0.4
5,477,639 - -1.0
5,477,842 + BWI76_RS26470 0.13 -1.5
5,477,890 - BWI76_RS26470 0.18 -1.2
5,477,890 - BWI76_RS26470 0.18 -1.4
5,477,940 + BWI76_RS26470 0.23 -1.0
5,477,948 - BWI76_RS26470 0.24 -0.4
5,478,061 - BWI76_RS26470 0.37 -1.4
5,478,102 - BWI76_RS26470 0.41 -1.9
5,478,282 + BWI76_RS26470 0.61 -1.6
5,478,498 + BWI76_RS26470 0.85 -2.7
5,478,649 + +0.1
5,478,673 + +0.9
5,478,684 + +0.1
5,478,753 + +0.3
5,478,809 - -0.8
5,478,855 + BWI76_RS26475 0.11 +0.3
5,478,963 - +0.9
5,479,037 - BWI76_RS26475 0.21 +0.1
5,479,057 - BWI76_RS26475 0.22 +1.6
5,479,171 + BWI76_RS26475 0.27 +0.1
5,479,229 + BWI76_RS26475 0.30 -1.5
5,479,263 + BWI76_RS26475 0.32 +0.2
5,479,375 - BWI76_RS26475 0.38 +0.4
5,479,439 + BWI76_RS26475 0.41 +0.4
5,479,476 - BWI76_RS26475 0.43 +0.6
5,479,501 + BWI76_RS26475 0.44 +0.5
5,479,580 - BWI76_RS26475 0.48 +0.9

Or see this region's nucleotide sequence