Experiment: A22 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26465 and BWI76_RS26470 overlap by 1 nucleotides BWI76_RS26470 and BWI76_RS26475 overlap by 4 nucleotides
BWI76_RS26465: BWI76_RS26465 - 4-amino-4-deoxy-L-arabinose lipid A transferase, at 5,476,074 to 5,477,729
_RS26465
BWI76_RS26470: BWI76_RS26470 - 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase, at 5,477,729 to 5,478,631
_RS26470
BWI76_RS26475: BWI76_RS26475 - bifunctional UDP-glucuronic acid oxidase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase, at 5,478,628 to 5,480,613
_RS26475
Position (kb) 5477
5478
5479 Strain fitness (log2 ratio) -2
-1
0
1 at 5476.740 kb on - strand, within BWI76_RS26465 at 5476.771 kb on - strand, within BWI76_RS26465 at 5476.792 kb on + strand, within BWI76_RS26465 at 5476.794 kb on - strand, within BWI76_RS26465 at 5476.843 kb on + strand, within BWI76_RS26465 at 5476.843 kb on + strand, within BWI76_RS26465 at 5477.022 kb on - strand, within BWI76_RS26465 at 5477.153 kb on + strand, within BWI76_RS26465 at 5477.166 kb on - strand, within BWI76_RS26465 at 5477.226 kb on + strand, within BWI76_RS26465 at 5477.453 kb on + strand, within BWI76_RS26465 at 5477.508 kb on + strand, within BWI76_RS26465 at 5477.639 kb on - strand at 5477.842 kb on + strand, within BWI76_RS26470 at 5477.890 kb on - strand, within BWI76_RS26470 at 5477.890 kb on - strand, within BWI76_RS26470 at 5477.940 kb on + strand, within BWI76_RS26470 at 5477.948 kb on - strand, within BWI76_RS26470 at 5478.061 kb on - strand, within BWI76_RS26470 at 5478.102 kb on - strand, within BWI76_RS26470 at 5478.282 kb on + strand, within BWI76_RS26470 at 5478.498 kb on + strand, within BWI76_RS26470 at 5478.649 kb on + strand at 5478.673 kb on + strand at 5478.684 kb on + strand at 5478.753 kb on + strand at 5478.809 kb on - strand at 5478.855 kb on + strand, within BWI76_RS26475 at 5478.963 kb on - strand at 5479.037 kb on - strand, within BWI76_RS26475 at 5479.057 kb on - strand, within BWI76_RS26475 at 5479.171 kb on + strand, within BWI76_RS26475 at 5479.229 kb on + strand, within BWI76_RS26475 at 5479.263 kb on + strand, within BWI76_RS26475 at 5479.375 kb on - strand, within BWI76_RS26475 at 5479.439 kb on + strand, within BWI76_RS26475 at 5479.476 kb on - strand, within BWI76_RS26475 at 5479.501 kb on + strand, within BWI76_RS26475 at 5479.580 kb on - strand, within BWI76_RS26475
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.1 mg/ml remove 5,476,740 - BWI76_RS26465 0.40 -0.1 5,476,771 - BWI76_RS26465 0.42 -0.3 5,476,792 + BWI76_RS26465 0.43 +0.7 5,476,794 - BWI76_RS26465 0.43 +0.2 5,476,843 + BWI76_RS26465 0.46 +0.4 5,476,843 + BWI76_RS26465 0.46 +0.2 5,477,022 - BWI76_RS26465 0.57 +0.3 5,477,153 + BWI76_RS26465 0.65 -0.3 5,477,166 - BWI76_RS26465 0.66 +0.9 5,477,226 + BWI76_RS26465 0.70 +0.4 5,477,453 + BWI76_RS26465 0.83 +0.1 5,477,508 + BWI76_RS26465 0.87 +0.4 5,477,639 - -1.0 5,477,842 + BWI76_RS26470 0.13 -1.5 5,477,890 - BWI76_RS26470 0.18 -1.2 5,477,890 - BWI76_RS26470 0.18 -1.4 5,477,940 + BWI76_RS26470 0.23 -1.0 5,477,948 - BWI76_RS26470 0.24 -0.4 5,478,061 - BWI76_RS26470 0.37 -1.4 5,478,102 - BWI76_RS26470 0.41 -1.9 5,478,282 + BWI76_RS26470 0.61 -1.6 5,478,498 + BWI76_RS26470 0.85 -2.7 5,478,649 + +0.1 5,478,673 + +0.9 5,478,684 + +0.1 5,478,753 + +0.3 5,478,809 - -0.8 5,478,855 + BWI76_RS26475 0.11 +0.3 5,478,963 - +0.9 5,479,037 - BWI76_RS26475 0.21 +0.1 5,479,057 - BWI76_RS26475 0.22 +1.6 5,479,171 + BWI76_RS26475 0.27 +0.1 5,479,229 + BWI76_RS26475 0.30 -1.5 5,479,263 + BWI76_RS26475 0.32 +0.2 5,479,375 - BWI76_RS26475 0.38 +0.4 5,479,439 + BWI76_RS26475 0.41 +0.4 5,479,476 - BWI76_RS26475 0.43 +0.6 5,479,501 + BWI76_RS26475 0.44 +0.5 5,479,580 - BWI76_RS26475 0.48 +0.9
Or see this region's nucleotide sequence