Experiment: A22 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26450 and BWI76_RS26455 overlap by 4 nucleotides BWI76_RS26455 and BWI76_RS26460 overlap by 1 nucleotides BWI76_RS26460 and BWI76_RS26465 overlap by 4 nucleotides
BWI76_RS26450: BWI76_RS26450 - hypothetical protein, at 5,474,310 to 5,475,359
_RS26450
BWI76_RS26455: BWI76_RS26455 - 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase, at 5,475,356 to 5,475,739
_RS26455
BWI76_RS26460: BWI76_RS26460 - 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE, at 5,475,739 to 5,476,077
_RS26460
BWI76_RS26465: BWI76_RS26465 - 4-amino-4-deoxy-L-arabinose lipid A transferase, at 5,476,074 to 5,477,729
_RS26465
Position (kb) 5475
5476 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 5474.395 kb on - strand at 5474.440 kb on - strand, within BWI76_RS26450 at 5474.703 kb on - strand, within BWI76_RS26450 at 5474.832 kb on + strand, within BWI76_RS26450 at 5474.875 kb on - strand, within BWI76_RS26450 at 5474.934 kb on - strand, within BWI76_RS26450 at 5474.952 kb on - strand, within BWI76_RS26450 at 5474.952 kb on - strand, within BWI76_RS26450 at 5474.981 kb on + strand, within BWI76_RS26450 at 5474.989 kb on - strand, within BWI76_RS26450 at 5474.989 kb on - strand, within BWI76_RS26450 at 5475.057 kb on + strand, within BWI76_RS26450 at 5475.163 kb on + strand, within BWI76_RS26450 at 5475.178 kb on + strand, within BWI76_RS26450 at 5475.186 kb on - strand, within BWI76_RS26450 at 5475.482 kb on - strand, within BWI76_RS26455 at 5475.482 kb on - strand, within BWI76_RS26455 at 5475.719 kb on - strand at 5475.867 kb on + strand, within BWI76_RS26460 at 5475.872 kb on + strand, within BWI76_RS26460 at 5475.875 kb on - strand, within BWI76_RS26460 at 5475.880 kb on - strand, within BWI76_RS26460 at 5475.967 kb on + strand, within BWI76_RS26460 at 5476.026 kb on + strand, within BWI76_RS26460 at 5476.036 kb on + strand, within BWI76_RS26460 at 5476.044 kb on - strand at 5476.211 kb on + strand at 5476.264 kb on + strand, within BWI76_RS26465 at 5476.272 kb on - strand, within BWI76_RS26465
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.1 mg/ml remove 5,474,395 - +1.1 5,474,440 - BWI76_RS26450 0.12 -0.2 5,474,703 - BWI76_RS26450 0.37 -0.6 5,474,832 + BWI76_RS26450 0.50 -0.5 5,474,875 - BWI76_RS26450 0.54 +0.1 5,474,934 - BWI76_RS26450 0.59 +0.2 5,474,952 - BWI76_RS26450 0.61 +0.3 5,474,952 - BWI76_RS26450 0.61 +0.3 5,474,981 + BWI76_RS26450 0.64 -0.0 5,474,989 - BWI76_RS26450 0.65 +0.4 5,474,989 - BWI76_RS26450 0.65 -0.4 5,475,057 + BWI76_RS26450 0.71 -0.6 5,475,163 + BWI76_RS26450 0.81 -0.1 5,475,178 + BWI76_RS26450 0.83 -0.2 5,475,186 - BWI76_RS26450 0.83 -0.4 5,475,482 - BWI76_RS26455 0.33 -3.7 5,475,482 - BWI76_RS26455 0.33 -4.1 5,475,719 - -3.4 5,475,867 + BWI76_RS26460 0.38 -3.6 5,475,872 + BWI76_RS26460 0.39 -3.2 5,475,875 - BWI76_RS26460 0.40 -1.3 5,475,880 - BWI76_RS26460 0.42 -3.4 5,475,967 + BWI76_RS26460 0.67 -3.7 5,476,026 + BWI76_RS26460 0.85 -2.9 5,476,036 + BWI76_RS26460 0.88 -4.0 5,476,044 - -3.2 5,476,211 + -0.3 5,476,264 + BWI76_RS26465 0.11 -0.1 5,476,272 - BWI76_RS26465 0.12 +0.6
Or see this region's nucleotide sequence