Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS26440

Experiment: A22 0.1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS26430 and BWI76_RS26435 are separated by 166 nucleotidesBWI76_RS26435 and BWI76_RS26440 are separated by 73 nucleotidesBWI76_RS26440 and BWI76_RS26445 are separated by 0 nucleotides BWI76_RS26430: BWI76_RS26430 - sulfurtransferase TusA, at 5,471,248 to 5,471,493 _RS26430 BWI76_RS26435: BWI76_RS26435 - hypothetical protein, at 5,471,660 to 5,472,325 _RS26435 BWI76_RS26440: BWI76_RS26440 - hypothetical protein, at 5,472,399 to 5,472,956 _RS26440 BWI76_RS26445: BWI76_RS26445 - MFS transporter, at 5,472,957 to 5,474,177 _RS26445 Position (kb) 5472 5473Strain fitness (log2 ratio) -1 0 1at 5471.530 kb on - strandat 5471.561 kb on - strandat 5471.620 kb on - strandat 5471.706 kb on - strandat 5471.889 kb on + strand, within BWI76_RS26435at 5471.889 kb on + strand, within BWI76_RS26435at 5471.907 kb on - strand, within BWI76_RS26435at 5471.926 kb on + strand, within BWI76_RS26435at 5472.117 kb on + strand, within BWI76_RS26435at 5472.200 kb on + strand, within BWI76_RS26435at 5472.320 kb on + strandat 5472.320 kb on + strandat 5472.320 kb on + strandat 5472.328 kb on - strandat 5472.617 kb on + strand, within BWI76_RS26440at 5472.957 kb on + strandat 5472.957 kb on + strandat 5473.226 kb on + strand, within BWI76_RS26445at 5473.395 kb on + strand, within BWI76_RS26445at 5473.403 kb on - strand, within BWI76_RS26445at 5473.418 kb on - strand, within BWI76_RS26445at 5473.463 kb on - strand, within BWI76_RS26445at 5473.524 kb on + strand, within BWI76_RS26445at 5473.524 kb on + strand, within BWI76_RS26445at 5473.532 kb on - strand, within BWI76_RS26445at 5473.532 kb on - strand, within BWI76_RS26445at 5473.688 kb on - strand, within BWI76_RS26445at 5473.769 kb on + strand, within BWI76_RS26445at 5473.791 kb on + strand, within BWI76_RS26445at 5473.822 kb on + strand, within BWI76_RS26445

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Per-strain Table

Position Strand Gene LocusTag Fraction A22 0.1 mg/ml
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5,471,530 - -0.5
5,471,561 - +0.4
5,471,620 - -0.5
5,471,706 - +0.4
5,471,889 + BWI76_RS26435 0.34 -0.2
5,471,889 + BWI76_RS26435 0.34 +0.5
5,471,907 - BWI76_RS26435 0.37 +0.9
5,471,926 + BWI76_RS26435 0.40 -0.7
5,472,117 + BWI76_RS26435 0.69 -0.3
5,472,200 + BWI76_RS26435 0.81 -0.1
5,472,320 + -1.2
5,472,320 + -1.0
5,472,320 + -0.3
5,472,328 - -1.4
5,472,617 + BWI76_RS26440 0.39 -1.1
5,472,957 + -0.6
5,472,957 + +0.4
5,473,226 + BWI76_RS26445 0.22 +0.2
5,473,395 + BWI76_RS26445 0.36 -0.1
5,473,403 - BWI76_RS26445 0.37 +0.5
5,473,418 - BWI76_RS26445 0.38 +0.2
5,473,463 - BWI76_RS26445 0.41 +0.2
5,473,524 + BWI76_RS26445 0.46 +0.2
5,473,524 + BWI76_RS26445 0.46 -0.4
5,473,532 - BWI76_RS26445 0.47 -0.2
5,473,532 - BWI76_RS26445 0.47 +0.2
5,473,688 - BWI76_RS26445 0.60 +0.6
5,473,769 + BWI76_RS26445 0.67 +0.6
5,473,791 + BWI76_RS26445 0.68 -1.2
5,473,822 + BWI76_RS26445 0.71 -0.1

Or see this region's nucleotide sequence