Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS26440
Experiment: A22 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | A22 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
5,471,530 | - | -0.5 | |||
5,471,561 | - | +0.4 | |||
5,471,620 | - | -0.5 | |||
5,471,706 | - | +0.4 | |||
5,471,889 | + | BWI76_RS26435 | 0.34 | -0.2 | |
5,471,889 | + | BWI76_RS26435 | 0.34 | +0.5 | |
5,471,907 | - | BWI76_RS26435 | 0.37 | +0.9 | |
5,471,926 | + | BWI76_RS26435 | 0.40 | -0.7 | |
5,472,117 | + | BWI76_RS26435 | 0.69 | -0.3 | |
5,472,200 | + | BWI76_RS26435 | 0.81 | -0.1 | |
5,472,320 | + | -1.2 | |||
5,472,320 | + | -1.0 | |||
5,472,320 | + | -0.3 | |||
5,472,328 | - | -1.4 | |||
5,472,617 | + | BWI76_RS26440 | 0.39 | -1.1 | |
5,472,957 | + | -0.6 | |||
5,472,957 | + | +0.4 | |||
5,473,226 | + | BWI76_RS26445 | 0.22 | +0.2 | |
5,473,395 | + | BWI76_RS26445 | 0.36 | -0.1 | |
5,473,403 | - | BWI76_RS26445 | 0.37 | +0.5 | |
5,473,418 | - | BWI76_RS26445 | 0.38 | +0.2 | |
5,473,463 | - | BWI76_RS26445 | 0.41 | +0.2 | |
5,473,524 | + | BWI76_RS26445 | 0.46 | +0.2 | |
5,473,524 | + | BWI76_RS26445 | 0.46 | -0.4 | |
5,473,532 | - | BWI76_RS26445 | 0.47 | -0.2 | |
5,473,532 | - | BWI76_RS26445 | 0.47 | +0.2 | |
5,473,688 | - | BWI76_RS26445 | 0.60 | +0.6 | |
5,473,769 | + | BWI76_RS26445 | 0.67 | +0.6 | |
5,473,791 | + | BWI76_RS26445 | 0.68 | -1.2 | |
5,473,822 | + | BWI76_RS26445 | 0.71 | -0.1 |
Or see this region's nucleotide sequence