Experiment: A22 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26180 and BWI76_RS26185 are separated by 59 nucleotides BWI76_RS26185 and BWI76_RS26190 are separated by 212 nucleotides BWI76_RS26190 and BWI76_RS26195 are separated by 52 nucleotides
BWI76_RS26180: BWI76_RS26180 - rhomboid family intramembrane serine protease GlpG, at 5,413,999 to 5,414,829
_RS26180
BWI76_RS26185: BWI76_RS26185 - thiosulfate sulfurtransferase, at 5,414,889 to 5,415,218
_RS26185
BWI76_RS26190: BWI76_RS26190 - glycerol-3-phosphate dehydrogenase, at 5,415,431 to 5,416,939
_RS26190
BWI76_RS26195: BWI76_RS26195 - glycogen phosphorylase, at 5,416,992 to 5,419,439
_RS26195
Position (kb)
5415
5416
5417 Strain fitness (log2 ratio)
-2
-1
0
1 at 5414.447 kb on + strand, within BWI76_RS26180 at 5414.608 kb on + strand, within BWI76_RS26180 at 5414.785 kb on + strand at 5414.793 kb on - strand at 5414.886 kb on + strand at 5414.964 kb on - strand, within BWI76_RS26185 at 5415.134 kb on - strand, within BWI76_RS26185 at 5415.210 kb on - strand at 5415.280 kb on + strand at 5415.322 kb on - strand at 5415.341 kb on + strand at 5415.506 kb on + strand at 5415.564 kb on + strand at 5415.624 kb on + strand, within BWI76_RS26190 at 5415.748 kb on - strand, within BWI76_RS26190 at 5416.162 kb on + strand, within BWI76_RS26190 at 5416.170 kb on - strand, within BWI76_RS26190 at 5416.363 kb on + strand, within BWI76_RS26190 at 5416.492 kb on + strand, within BWI76_RS26190 at 5416.511 kb on - strand, within BWI76_RS26190 at 5416.568 kb on - strand, within BWI76_RS26190 at 5416.871 kb on - strand at 5417.029 kb on + strand at 5417.116 kb on + strand at 5417.116 kb on + strand at 5417.335 kb on + strand, within BWI76_RS26195 at 5417.336 kb on + strand, within BWI76_RS26195 at 5417.413 kb on - strand, within BWI76_RS26195 at 5417.540 kb on + strand, within BWI76_RS26195 at 5417.570 kb on - strand, within BWI76_RS26195 at 5417.788 kb on + strand, within BWI76_RS26195 at 5417.856 kb on - strand, within BWI76_RS26195 at 5417.879 kb on + strand, within BWI76_RS26195
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.1 mg/ml remove 5,414,447 + BWI76_RS26180 0.54 -0.1 5,414,608 + BWI76_RS26180 0.73 -0.2 5,414,785 + -1.4 5,414,793 - -0.1 5,414,886 + -0.7 5,414,964 - BWI76_RS26185 0.23 +0.3 5,415,134 - BWI76_RS26185 0.74 +1.3 5,415,210 - +0.1 5,415,280 + -1.0 5,415,322 - -0.1 5,415,341 + +1.0 5,415,506 + -1.2 5,415,564 + -1.4 5,415,624 + BWI76_RS26190 0.13 -1.8 5,415,748 - BWI76_RS26190 0.21 +1.3 5,416,162 + BWI76_RS26190 0.48 +0.2 5,416,170 - BWI76_RS26190 0.49 -2.2 5,416,363 + BWI76_RS26190 0.62 -0.7 5,416,492 + BWI76_RS26190 0.70 -1.4 5,416,511 - BWI76_RS26190 0.72 -0.8 5,416,568 - BWI76_RS26190 0.75 -1.2 5,416,871 - -1.5 5,417,029 + -0.8 5,417,116 + +0.3 5,417,116 + +0.3 5,417,335 + BWI76_RS26195 0.14 -0.5 5,417,336 + BWI76_RS26195 0.14 +0.3 5,417,413 - BWI76_RS26195 0.17 -0.9 5,417,540 + BWI76_RS26195 0.22 -1.0 5,417,570 - BWI76_RS26195 0.24 -0.7 5,417,788 + BWI76_RS26195 0.33 -1.2 5,417,856 - BWI76_RS26195 0.35 -0.2 5,417,879 + BWI76_RS26195 0.36 +0.3
Or see this region's nucleotide sequence