Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS24290
Experiment: A22 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | A22 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
5,059,658 | - | BWI76_RS24285 | 0.28 | +0.3 | |
5,059,746 | + | BWI76_RS24285 | 0.36 | -0.5 | |
5,059,750 | + | BWI76_RS24285 | 0.36 | +0.5 | |
5,059,900 | + | BWI76_RS24285 | 0.49 | -0.4 | |
5,060,087 | - | BWI76_RS24285 | 0.64 | +0.2 | |
5,060,098 | + | BWI76_RS24285 | 0.65 | +0.1 | |
5,060,102 | - | BWI76_RS24285 | 0.66 | -0.6 | |
5,060,119 | - | BWI76_RS24285 | 0.67 | -0.3 | |
5,060,286 | - | BWI76_RS24285 | 0.81 | -0.7 | |
5,060,592 | + | -0.7 | |||
5,060,721 | + | BWI76_RS24290 | 0.12 | -2.7 | |
5,060,906 | - | BWI76_RS24290 | 0.40 | -1.3 | |
5,060,949 | - | BWI76_RS24290 | 0.47 | -0.7 | |
5,061,063 | + | BWI76_RS24290 | 0.64 | -1.7 | |
5,061,202 | + | BWI76_RS24290 | 0.85 | -1.4 | |
5,061,347 | - | -0.9 | |||
5,061,432 | - | BWI76_RS24295 | 0.11 | -0.2 | |
5,061,572 | + | BWI76_RS24295 | 0.27 | -0.4 | |
5,061,662 | - | +0.5 | |||
5,061,719 | + | BWI76_RS24295 | 0.43 | +0.3 | |
5,061,953 | + | BWI76_RS24295 | 0.69 | -0.3 | |
5,062,013 | + | BWI76_RS24295 | 0.76 | +0.9 | |
5,062,126 | - | BWI76_RS24295 | 0.88 | -0.1 | |
5,062,149 | - | +0.7 | |||
5,062,252 | - | +0.4 |
Or see this region's nucleotide sequence