Experiment: A22 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24100 and BWI76_RS24105 are separated by 8 nucleotides BWI76_RS24105 and BWI76_RS24110 overlap by 4 nucleotides BWI76_RS24110 and BWI76_RS24115 are separated by 12 nucleotides BWI76_RS24115 and BWI76_RS24120 overlap by 8 nucleotides
BWI76_RS24100: BWI76_RS24100 - YggS family pyridoxal phosphate enzyme, at 5,027,486 to 5,028,199
_RS24100
BWI76_RS24105: BWI76_RS24105 - resistance protein, at 5,028,208 to 5,028,774
_RS24105
BWI76_RS24110: BWI76_RS24110 - YggU family protein, at 5,028,771 to 5,029,061
_RS24110
BWI76_RS24115: BWI76_RS24115 - non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family, at 5,029,074 to 5,029,667
_RS24115
BWI76_RS24120: BWI76_RS24120 - YggW family oxidoreductase, at 5,029,660 to 5,030,796
_RS24120
Position (kb) 5029
5030 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5028.132 kb on + strand at 5028.140 kb on - strand at 5028.140 kb on - strand at 5028.413 kb on + strand, within BWI76_RS24105 at 5028.413 kb on + strand, within BWI76_RS24105 at 5028.421 kb on - strand, within BWI76_RS24105 at 5028.421 kb on - strand, within BWI76_RS24105 at 5028.447 kb on + strand, within BWI76_RS24105 at 5028.447 kb on + strand, within BWI76_RS24105 at 5028.560 kb on + strand, within BWI76_RS24105 at 5028.723 kb on + strand at 5028.759 kb on + strand at 5028.824 kb on + strand, within BWI76_RS24110 at 5028.824 kb on + strand, within BWI76_RS24110 at 5029.038 kb on - strand at 5029.292 kb on - strand, within BWI76_RS24115 at 5029.422 kb on + strand, within BWI76_RS24115 at 5029.461 kb on + strand, within BWI76_RS24115 at 5029.584 kb on + strand, within BWI76_RS24115 at 5029.592 kb on - strand, within BWI76_RS24115 at 5029.592 kb on - strand, within BWI76_RS24115 at 5029.592 kb on - strand, within BWI76_RS24115 at 5029.819 kb on - strand, within BWI76_RS24120 at 5030.128 kb on - strand, within BWI76_RS24120 at 5030.128 kb on - strand, within BWI76_RS24120 at 5030.242 kb on + strand, within BWI76_RS24120 at 5030.282 kb on + strand, within BWI76_RS24120 at 5030.330 kb on + strand at 5030.338 kb on - strand, within BWI76_RS24120 at 5030.486 kb on + strand, within BWI76_RS24120 at 5030.518 kb on - strand at 5030.621 kb on - strand, within BWI76_RS24120 at 5030.654 kb on + strand, within BWI76_RS24120 at 5030.662 kb on - strand, within BWI76_RS24120
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.1 mg/ml remove 5,028,132 + -0.6 5,028,140 - -2.1 5,028,140 - -0.2 5,028,413 + BWI76_RS24105 0.36 +1.7 5,028,413 + BWI76_RS24105 0.36 +0.7 5,028,421 - BWI76_RS24105 0.38 +0.2 5,028,421 - BWI76_RS24105 0.38 +0.7 5,028,447 + BWI76_RS24105 0.42 -0.0 5,028,447 + BWI76_RS24105 0.42 -0.5 5,028,560 + BWI76_RS24105 0.62 +1.9 5,028,723 + +0.2 5,028,759 + -0.1 5,028,824 + BWI76_RS24110 0.18 -0.5 5,028,824 + BWI76_RS24110 0.18 -0.1 5,029,038 - -0.9 5,029,292 - BWI76_RS24115 0.37 -1.3 5,029,422 + BWI76_RS24115 0.59 -0.4 5,029,461 + BWI76_RS24115 0.65 -1.0 5,029,584 + BWI76_RS24115 0.86 -1.0 5,029,592 - BWI76_RS24115 0.87 -2.3 5,029,592 - BWI76_RS24115 0.87 -1.6 5,029,592 - BWI76_RS24115 0.87 -2.3 5,029,819 - BWI76_RS24120 0.14 +1.1 5,030,128 - BWI76_RS24120 0.41 +0.3 5,030,128 - BWI76_RS24120 0.41 -2.1 5,030,242 + BWI76_RS24120 0.51 +0.1 5,030,282 + BWI76_RS24120 0.55 -0.5 5,030,330 + +1.3 5,030,338 - BWI76_RS24120 0.60 +0.7 5,030,486 + BWI76_RS24120 0.73 -1.8 5,030,518 - +1.9 5,030,621 - BWI76_RS24120 0.85 -0.6 5,030,654 + BWI76_RS24120 0.87 -0.0 5,030,662 - BWI76_RS24120 0.88 +1.2
Or see this region's nucleotide sequence