Experiment: A22 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19725 and BWI76_RS19730 are separated by 16 nucleotides BWI76_RS19730 and BWI76_RS19735 are separated by 0 nucleotides
BWI76_RS19725: BWI76_RS19725 - PTS fructose transporter subunit EIIBC, at 4,122,963 to 4,124,639
_RS19725
BWI76_RS19730: BWI76_RS19730 - 1-phosphofructokinase, at 4,124,656 to 4,125,594
_RS19730
BWI76_RS19735: BWI76_RS19735 - bifunctional PTS fructose transporter subunit IIA/HPr protein, at 4,125,595 to 4,126,725
_RS19735
Position (kb)
4124
4125
4126 Strain fitness (log2 ratio)
-1
0
1
2 at 4123.932 kb on + strand, within BWI76_RS19725 at 4124.177 kb on + strand, within BWI76_RS19725 at 4124.185 kb on - strand, within BWI76_RS19725 at 4124.499 kb on - strand at 4124.598 kb on + strand at 4124.856 kb on + strand, within BWI76_RS19730 at 4125.000 kb on + strand, within BWI76_RS19730 at 4125.011 kb on + strand, within BWI76_RS19730 at 4125.207 kb on - strand, within BWI76_RS19730 at 4125.659 kb on + strand at 4125.667 kb on - strand at 4125.861 kb on - strand, within BWI76_RS19735 at 4126.059 kb on - strand, within BWI76_RS19735 at 4126.211 kb on + strand, within BWI76_RS19735 at 4126.331 kb on - strand, within BWI76_RS19735 at 4126.343 kb on + strand, within BWI76_RS19735 at 4126.351 kb on - strand, within BWI76_RS19735 at 4126.392 kb on - strand, within BWI76_RS19735 at 4126.530 kb on + strand, within BWI76_RS19735
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.1 mg/ml remove 4,123,932 + BWI76_RS19725 0.58 -0.2 4,124,177 + BWI76_RS19725 0.72 -1.2 4,124,185 - BWI76_RS19725 0.73 -0.0 4,124,499 - +0.1 4,124,598 + -0.1 4,124,856 + BWI76_RS19730 0.21 -1.4 4,125,000 + BWI76_RS19730 0.37 -1.2 4,125,011 + BWI76_RS19730 0.38 -0.1 4,125,207 - BWI76_RS19730 0.59 -0.9 4,125,659 + -0.0 4,125,667 - +0.1 4,125,861 - BWI76_RS19735 0.24 +2.7 4,126,059 - BWI76_RS19735 0.41 +2.6 4,126,211 + BWI76_RS19735 0.54 -0.5 4,126,331 - BWI76_RS19735 0.65 -0.0 4,126,343 + BWI76_RS19735 0.66 -1.6 4,126,351 - BWI76_RS19735 0.67 +0.0 4,126,392 - BWI76_RS19735 0.70 -0.1 4,126,530 + BWI76_RS19735 0.83 -0.3
Or see this region's nucleotide sequence