Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17775

Experiment: A22 0.1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS17765 and BWI76_RS17770 are separated by 94 nucleotidesBWI76_RS17770 and BWI76_RS17775 are separated by 16 nucleotidesBWI76_RS17775 and BWI76_RS17780 are separated by 126 nucleotidesBWI76_RS17780 and BWI76_RS17785 are separated by 23 nucleotides BWI76_RS17765: BWI76_RS17765 - hypothetical protein, at 3,694,431 to 3,694,877 _RS17765 BWI76_RS17770: BWI76_RS17770 - isomerase/hydrolase, at 3,694,972 to 3,695,631 _RS17770 BWI76_RS17775: BWI76_RS17775 - hypothetical protein, at 3,695,648 to 3,695,929 _RS17775 BWI76_RS17780: BWI76_RS17780 - septum formation inhibitor, at 3,696,056 to 3,696,754 _RS17780 BWI76_RS17785: BWI76_RS17785 - septum site-determining protein MinD, at 3,696,778 to 3,697,590 _RS17785 Position (kb) 3695 3696Strain fitness (log2 ratio) -1 0 1at 3694.655 kb on - strand, within BWI76_RS17765at 3694.948 kb on + strandat 3694.977 kb on + strandat 3695.186 kb on - strand, within BWI76_RS17770at 3695.420 kb on + strand, within BWI76_RS17770at 3695.614 kb on + strandat 3695.614 kb on + strandat 3695.614 kb on + strandat 3695.646 kb on - strandat 3695.668 kb on + strandat 3695.721 kb on + strand, within BWI76_RS17775at 3695.821 kb on + strand, within BWI76_RS17775at 3695.966 kb on + strandat 3695.968 kb on + strandat 3695.968 kb on + strandat 3695.976 kb on - strandat 3696.017 kb on - strandat 3696.043 kb on + strandat 3696.089 kb on + strandat 3696.097 kb on - strandat 3696.200 kb on - strand, within BWI76_RS17780at 3696.379 kb on + strand, within BWI76_RS17780at 3696.456 kb on + strand, within BWI76_RS17780at 3696.474 kb on - strand, within BWI76_RS17780at 3696.544 kb on + strand, within BWI76_RS17780at 3696.720 kb on - strandat 3696.851 kb on - strandat 3696.914 kb on - strand, within BWI76_RS17785

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Per-strain Table

Position Strand Gene LocusTag Fraction A22 0.1 mg/ml
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3,694,655 - BWI76_RS17765 0.50 -0.9
3,694,948 + -0.5
3,694,977 + -0.0
3,695,186 - BWI76_RS17770 0.32 +0.1
3,695,420 + BWI76_RS17770 0.68 -1.7
3,695,614 + +0.0
3,695,614 + +0.6
3,695,614 + +0.2
3,695,646 - -0.3
3,695,668 + +0.8
3,695,721 + BWI76_RS17775 0.26 -1.6
3,695,821 + BWI76_RS17775 0.61 -0.8
3,695,966 + +0.2
3,695,968 + -0.2
3,695,968 + +0.8
3,695,976 - -1.1
3,696,017 - +1.5
3,696,043 + +0.3
3,696,089 + -0.2
3,696,097 - +0.1
3,696,200 - BWI76_RS17780 0.21 +0.8
3,696,379 + BWI76_RS17780 0.46 -0.4
3,696,456 + BWI76_RS17780 0.57 +0.0
3,696,474 - BWI76_RS17780 0.60 +0.3
3,696,544 + BWI76_RS17780 0.70 -0.1
3,696,720 - +0.4
3,696,851 - +0.3
3,696,914 - BWI76_RS17785 0.17 +1.0

Or see this region's nucleotide sequence