Experiment: A22 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15610 and BWI76_RS15615 are separated by 2 nucleotides BWI76_RS15615 and BWI76_RS15620 overlap by 1 nucleotides BWI76_RS15620 and BWI76_RS15625 are separated by 60 nucleotides BWI76_RS15625 and BWI76_RS15630 are separated by 9 nucleotides BWI76_RS15630 and BWI76_RS15635 are separated by 17 nucleotides BWI76_RS15635 and BWI76_RS15640 are separated by 12 nucleotides
BWI76_RS15610: BWI76_RS15610 - hypothetical protein, at 3,265,591 to 3,265,953
_RS15610
BWI76_RS15615: BWI76_RS15615 - hypothetical protein, at 3,265,956 to 3,266,126
_RS15615
BWI76_RS15620: BWI76_RS15620 - hypothetical protein, at 3,266,126 to 3,266,527
_RS15620
BWI76_RS15625: BWI76_RS15625 - hypothetical protein, at 3,266,588 to 3,266,770
_RS15625
BWI76_RS15630: BWI76_RS15630 - hypothetical protein, at 3,266,780 to 3,267,856
_RS15630
BWI76_RS15635: BWI76_RS15635 - hypothetical protein, at 3,267,874 to 3,268,320
_RS15635
BWI76_RS15640: BWI76_RS15640 - hypothetical protein, at 3,268,333 to 3,269,598
_RS15640
Position (kb)
3266
3267
3268 Strain fitness (log2 ratio)
-2
-1
0
1 at 3266.131 kb on - strand at 3266.256 kb on - strand, within BWI76_RS15620 at 3266.502 kb on + strand at 3266.510 kb on - strand at 3266.702 kb on - strand, within BWI76_RS15625 at 3266.964 kb on - strand, within BWI76_RS15630 at 3267.066 kb on + strand at 3267.237 kb on - strand, within BWI76_RS15630 at 3267.495 kb on - strand, within BWI76_RS15630 at 3267.965 kb on - strand, within BWI76_RS15635 at 3267.965 kb on - strand, within BWI76_RS15635 at 3268.068 kb on - strand, within BWI76_RS15635 at 3268.143 kb on - strand, within BWI76_RS15635 at 3268.187 kb on + strand, within BWI76_RS15635 at 3268.271 kb on + strand, within BWI76_RS15635 at 3268.279 kb on - strand at 3268.771 kb on + strand, within BWI76_RS15640 at 3268.836 kb on - strand, within BWI76_RS15640
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.1 mg/ml remove 3,266,131 - +1.0 3,266,256 - BWI76_RS15620 0.32 -0.8 3,266,502 + -1.5 3,266,510 - -0.6 3,266,702 - BWI76_RS15625 0.62 -0.6 3,266,964 - BWI76_RS15630 0.17 -1.2 3,267,066 + +0.7 3,267,237 - BWI76_RS15630 0.42 -1.2 3,267,495 - BWI76_RS15630 0.66 -0.1 3,267,965 - BWI76_RS15635 0.20 -0.3 3,267,965 - BWI76_RS15635 0.20 -2.4 3,268,068 - BWI76_RS15635 0.43 -0.6 3,268,143 - BWI76_RS15635 0.60 -0.9 3,268,187 + BWI76_RS15635 0.70 +0.2 3,268,271 + BWI76_RS15635 0.89 -1.9 3,268,279 - +0.3 3,268,771 + BWI76_RS15640 0.35 -0.3 3,268,836 - BWI76_RS15640 0.40 -0.5
Or see this region's nucleotide sequence