Experiment: A22 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15600 and BWI76_RS15605 overlap by 4 nucleotides BWI76_RS15605 and BWI76_RS15610 are separated by 2 nucleotides BWI76_RS15610 and BWI76_RS15615 are separated by 2 nucleotides BWI76_RS15615 and BWI76_RS15620 overlap by 1 nucleotides BWI76_RS15620 and BWI76_RS15625 are separated by 60 nucleotides BWI76_RS15625 and BWI76_RS15630 are separated by 9 nucleotides
BWI76_RS15600: BWI76_RS15600 - hypothetical protein, at 3,264,840 to 3,265,223
_RS15600
BWI76_RS15605: BWI76_RS15605 - hypothetical protein, at 3,265,220 to 3,265,588
_RS15605
BWI76_RS15610: BWI76_RS15610 - hypothetical protein, at 3,265,591 to 3,265,953
_RS15610
BWI76_RS15615: BWI76_RS15615 - hypothetical protein, at 3,265,956 to 3,266,126
_RS15615
BWI76_RS15620: BWI76_RS15620 - hypothetical protein, at 3,266,126 to 3,266,527
_RS15620
BWI76_RS15625: BWI76_RS15625 - hypothetical protein, at 3,266,588 to 3,266,770
_RS15625
BWI76_RS15630: BWI76_RS15630 - hypothetical protein, at 3,266,780 to 3,267,856
_RS15630
Position (kb)
3266
3267 Strain fitness (log2 ratio)
-1
0
1 at 3265.209 kb on + strand at 3265.292 kb on - strand, within BWI76_RS15605 at 3265.517 kb on - strand, within BWI76_RS15605 at 3266.131 kb on - strand at 3266.256 kb on - strand, within BWI76_RS15620 at 3266.502 kb on + strand at 3266.510 kb on - strand at 3266.702 kb on - strand, within BWI76_RS15625 at 3266.964 kb on - strand, within BWI76_RS15630 at 3267.066 kb on + strand at 3267.237 kb on - strand, within BWI76_RS15630 at 3267.495 kb on - strand, within BWI76_RS15630
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.1 mg/ml remove 3,265,209 + +0.1 3,265,292 - BWI76_RS15605 0.20 -0.2 3,265,517 - BWI76_RS15605 0.80 -0.1 3,266,131 - +1.0 3,266,256 - BWI76_RS15620 0.32 -0.8 3,266,502 + -1.5 3,266,510 - -0.6 3,266,702 - BWI76_RS15625 0.62 -0.6 3,266,964 - BWI76_RS15630 0.17 -1.2 3,267,066 + +0.7 3,267,237 - BWI76_RS15630 0.42 -1.2 3,267,495 - BWI76_RS15630 0.66 -0.1
Or see this region's nucleotide sequence