Experiment: A22 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15430 and BWI76_RS15435 are separated by 102 nucleotides BWI76_RS15435 and BWI76_RS15440 are separated by 25 nucleotides BWI76_RS15440 and BWI76_RS15445 are separated by 380 nucleotides BWI76_RS15445 and BWI76_RS15450 are separated by 62 nucleotides
BWI76_RS15430: BWI76_RS15430 - hypothetical protein, at 3,234,917 to 3,236,005
_RS15430
BWI76_RS15435: BWI76_RS15435 - hypothetical protein, at 3,236,108 to 3,236,371
_RS15435
BWI76_RS15440: BWI76_RS15440 - hypothetical protein, at 3,236,397 to 3,236,651
_RS15440
BWI76_RS15445: BWI76_RS15445 - hypothetical protein, at 3,237,032 to 3,237,304
_RS15445
BWI76_RS15450: BWI76_RS15450 - hypothetical protein, at 3,237,367 to 3,237,678
_RS15450
Position (kb)
3236
3237 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3235.139 kb on + strand, within BWI76_RS15430 at 3235.291 kb on - strand, within BWI76_RS15430 at 3235.320 kb on - strand, within BWI76_RS15430 at 3235.872 kb on + strand, within BWI76_RS15430 at 3235.880 kb on - strand, within BWI76_RS15430 at 3235.942 kb on - strand at 3236.045 kb on - strand at 3236.320 kb on + strand, within BWI76_RS15435 at 3236.410 kb on + strand at 3236.567 kb on - strand, within BWI76_RS15440 at 3236.581 kb on + strand, within BWI76_RS15440 at 3236.776 kb on - strand at 3236.863 kb on + strand at 3236.869 kb on + strand at 3236.892 kb on + strand at 3236.899 kb on + strand at 3236.904 kb on + strand at 3236.907 kb on - strand at 3236.924 kb on - strand at 3236.953 kb on + strand at 3236.961 kb on - strand at 3236.978 kb on - strand at 3237.015 kb on + strand at 3237.015 kb on + strand at 3237.015 kb on + strand at 3237.015 kb on + strand at 3237.165 kb on - strand, within BWI76_RS15445 at 3237.170 kb on + strand, within BWI76_RS15445 at 3237.198 kb on - strand, within BWI76_RS15445 at 3237.212 kb on - strand, within BWI76_RS15445 at 3237.228 kb on + strand, within BWI76_RS15445 at 3237.250 kb on + strand, within BWI76_RS15445 at 3237.356 kb on - strand at 3237.360 kb on + strand at 3237.368 kb on - strand at 3237.368 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.1 mg/ml remove 3,235,139 + BWI76_RS15430 0.20 -0.0 3,235,291 - BWI76_RS15430 0.34 -0.9 3,235,320 - BWI76_RS15430 0.37 +0.5 3,235,872 + BWI76_RS15430 0.88 -0.6 3,235,880 - BWI76_RS15430 0.88 +0.8 3,235,942 - +0.3 3,236,045 - +0.0 3,236,320 + BWI76_RS15435 0.80 -0.8 3,236,410 + +0.3 3,236,567 - BWI76_RS15440 0.67 -0.1 3,236,581 + BWI76_RS15440 0.72 +0.2 3,236,776 - +1.3 3,236,863 + +0.0 3,236,869 + -0.6 3,236,892 + -0.0 3,236,899 + -0.2 3,236,904 + +0.2 3,236,907 - -0.8 3,236,924 - -1.9 3,236,953 + +0.1 3,236,961 - -0.4 3,236,978 - +2.1 3,237,015 + -0.9 3,237,015 + -0.8 3,237,015 + -0.1 3,237,015 + -0.2 3,237,165 - BWI76_RS15445 0.49 +0.2 3,237,170 + BWI76_RS15445 0.51 +0.8 3,237,198 - BWI76_RS15445 0.61 -0.6 3,237,212 - BWI76_RS15445 0.66 -1.0 3,237,228 + BWI76_RS15445 0.72 -1.3 3,237,250 + BWI76_RS15445 0.80 +0.7 3,237,356 - -1.7 3,237,360 + +0.5 3,237,368 - +0.1 3,237,368 - -0.4
Or see this region's nucleotide sequence