Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11300

Experiment: A22 0.1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11290 and BWI76_RS11295 are separated by 87 nucleotidesBWI76_RS11295 and BWI76_RS11300 are separated by 82 nucleotidesBWI76_RS11300 and BWI76_RS11305 are separated by 54 nucleotides BWI76_RS11290: BWI76_RS11290 - MFS transporter, at 2,380,590 to 2,381,819 _RS11290 BWI76_RS11295: BWI76_RS11295 - AraC family transcriptional regulator, at 2,381,907 to 2,382,713 _RS11295 BWI76_RS11300: BWI76_RS11300 - cupin, at 2,382,796 to 2,383,158 _RS11300 BWI76_RS11305: BWI76_RS11305 - adenylosuccinate lyase, at 2,383,213 to 2,384,583 _RS11305 Position (kb) 2382 2383 2384Strain fitness (log2 ratio) -1 0 1at 2382.184 kb on - strand, within BWI76_RS11295at 2382.749 kb on - strandat 2382.780 kb on - strandat 2382.815 kb on - strandat 2382.893 kb on - strand, within BWI76_RS11300

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Per-strain Table

Position Strand Gene LocusTag Fraction A22 0.1 mg/ml
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2,382,184 - BWI76_RS11295 0.34 -0.8
2,382,749 - -0.6
2,382,780 - -0.3
2,382,815 - +0.7
2,382,893 - BWI76_RS11300 0.27 -1.0

Or see this region's nucleotide sequence