Experiment: A22 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09910 and BWI76_RS09915 are separated by 168 nucleotides BWI76_RS09915 and BWI76_RS09920 overlap by 4 nucleotides
BWI76_RS09910: BWI76_RS09910 - dihydroorotate dehydrogenase (quinone), at 2,084,229 to 2,085,239
_RS09910
BWI76_RS09915: BWI76_RS09915 - cell division protein ZapC, at 2,085,408 to 2,085,950
_RS09915
BWI76_RS09920: BWI76_RS09920 - hypothetical protein, at 2,085,947 to 2,087,056
_RS09920
Position (kb)
2085
2086 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2084.445 kb on - strand, within BWI76_RS09910 at 2084.504 kb on + strand, within BWI76_RS09910 at 2084.518 kb on + strand, within BWI76_RS09910 at 2084.527 kb on + strand, within BWI76_RS09910 at 2084.527 kb on + strand, within BWI76_RS09910 at 2084.550 kb on - strand, within BWI76_RS09910 at 2084.579 kb on + strand, within BWI76_RS09910 at 2084.579 kb on + strand, within BWI76_RS09910 at 2084.579 kb on + strand, within BWI76_RS09910 at 2084.586 kb on + strand, within BWI76_RS09910 at 2084.586 kb on + strand, within BWI76_RS09910 at 2084.592 kb on - strand, within BWI76_RS09910 at 2084.594 kb on - strand, within BWI76_RS09910 at 2084.597 kb on - strand, within BWI76_RS09910 at 2084.615 kb on + strand, within BWI76_RS09910 at 2084.654 kb on + strand, within BWI76_RS09910 at 2084.662 kb on - strand, within BWI76_RS09910 at 2084.662 kb on - strand, within BWI76_RS09910 at 2084.686 kb on - strand, within BWI76_RS09910 at 2084.760 kb on + strand, within BWI76_RS09910 at 2084.761 kb on + strand, within BWI76_RS09910 at 2084.761 kb on + strand, within BWI76_RS09910 at 2084.761 kb on + strand, within BWI76_RS09910 at 2084.761 kb on + strand, within BWI76_RS09910 at 2084.761 kb on + strand, within BWI76_RS09910 at 2084.761 kb on + strand, within BWI76_RS09910 at 2084.761 kb on + strand, within BWI76_RS09910 at 2084.761 kb on + strand, within BWI76_RS09910 at 2084.761 kb on + strand, within BWI76_RS09910 at 2084.761 kb on + strand, within BWI76_RS09910 at 2084.761 kb on + strand, within BWI76_RS09910 at 2084.761 kb on + strand, within BWI76_RS09910 at 2084.761 kb on + strand, within BWI76_RS09910 at 2084.761 kb on + strand, within BWI76_RS09910 at 2084.768 kb on - strand, within BWI76_RS09910 at 2084.769 kb on - strand, within BWI76_RS09910 at 2084.769 kb on - strand, within BWI76_RS09910 at 2084.769 kb on - strand, within BWI76_RS09910 at 2084.769 kb on - strand, within BWI76_RS09910 at 2084.769 kb on - strand, within BWI76_RS09910 at 2084.769 kb on - strand, within BWI76_RS09910 at 2084.769 kb on - strand, within BWI76_RS09910 at 2084.769 kb on - strand, within BWI76_RS09910 at 2084.769 kb on - strand, within BWI76_RS09910 at 2084.769 kb on - strand, within BWI76_RS09910 at 2084.769 kb on - strand, within BWI76_RS09910 at 2084.769 kb on - strand, within BWI76_RS09910 at 2084.769 kb on - strand, within BWI76_RS09910 at 2084.769 kb on - strand, within BWI76_RS09910 at 2084.884 kb on + strand, within BWI76_RS09910 at 2084.892 kb on - strand, within BWI76_RS09910 at 2084.909 kb on + strand, within BWI76_RS09910 at 2084.926 kb on + strand, within BWI76_RS09910 at 2084.934 kb on - strand, within BWI76_RS09910 at 2084.978 kb on - strand, within BWI76_RS09910 at 2084.987 kb on + strand, within BWI76_RS09910 at 2084.987 kb on + strand, within BWI76_RS09910 at 2084.993 kb on + strand, within BWI76_RS09910 at 2084.995 kb on + strand, within BWI76_RS09910 at 2084.995 kb on - strand, within BWI76_RS09910 at 2085.017 kb on - strand, within BWI76_RS09910 at 2085.023 kb on + strand, within BWI76_RS09910 at 2085.033 kb on + strand, within BWI76_RS09910 at 2085.033 kb on + strand, within BWI76_RS09910 at 2085.036 kb on - strand, within BWI76_RS09910 at 2085.044 kb on + strand, within BWI76_RS09910 at 2085.044 kb on + strand, within BWI76_RS09910 at 2085.044 kb on + strand, within BWI76_RS09910 at 2085.044 kb on + strand, within BWI76_RS09910 at 2085.044 kb on + strand, within BWI76_RS09910 at 2085.052 kb on - strand, within BWI76_RS09910 at 2085.118 kb on + strand, within BWI76_RS09910 at 2085.126 kb on - strand, within BWI76_RS09910 at 2085.131 kb on - strand at 2085.151 kb on - strand at 2085.155 kb on + strand at 2085.160 kb on + strand at 2085.168 kb on - strand at 2085.168 kb on - strand at 2085.168 kb on - strand at 2085.171 kb on + strand at 2085.233 kb on + strand at 2085.233 kb on + strand at 2085.241 kb on - strand at 2085.359 kb on - strand at 2085.361 kb on - strand at 2085.397 kb on - strand at 2085.413 kb on + strand at 2085.421 kb on - strand at 2085.441 kb on - strand at 2085.453 kb on + strand at 2085.453 kb on + strand at 2085.453 kb on + strand at 2085.461 kb on - strand at 2085.512 kb on - strand, within BWI76_RS09915 at 2085.528 kb on + strand, within BWI76_RS09915 at 2085.570 kb on + strand, within BWI76_RS09915 at 2085.612 kb on - strand, within BWI76_RS09915 at 2085.698 kb on + strand, within BWI76_RS09915 at 2085.698 kb on + strand, within BWI76_RS09915 at 2085.698 kb on + strand, within BWI76_RS09915 at 2085.706 kb on - strand, within BWI76_RS09915 at 2085.706 kb on - strand, within BWI76_RS09915 at 2085.706 kb on - strand, within BWI76_RS09915 at 2085.908 kb on - strand at 2085.989 kb on + strand at 2085.994 kb on + strand at 2085.994 kb on + strand at 2085.997 kb on - strand at 2086.002 kb on - strand at 2086.099 kb on - strand, within BWI76_RS09920 at 2086.201 kb on - strand, within BWI76_RS09920 at 2086.346 kb on + strand, within BWI76_RS09920 at 2086.346 kb on + strand, within BWI76_RS09920 at 2086.354 kb on - strand, within BWI76_RS09920 at 2086.435 kb on - strand, within BWI76_RS09920 at 2086.692 kb on - strand, within BWI76_RS09920 at 2086.745 kb on + strand, within BWI76_RS09920 at 2086.858 kb on - strand, within BWI76_RS09920 at 2086.925 kb on - strand, within BWI76_RS09920
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.1 mg/ml remove 2,084,445 - BWI76_RS09910 0.21 +1.0 2,084,504 + BWI76_RS09910 0.27 -0.5 2,084,518 + BWI76_RS09910 0.29 -1.4 2,084,527 + BWI76_RS09910 0.29 -0.6 2,084,527 + BWI76_RS09910 0.29 -0.7 2,084,550 - BWI76_RS09910 0.32 -1.2 2,084,579 + BWI76_RS09910 0.35 -0.9 2,084,579 + BWI76_RS09910 0.35 -0.7 2,084,579 + BWI76_RS09910 0.35 -1.9 2,084,586 + BWI76_RS09910 0.35 -0.4 2,084,586 + BWI76_RS09910 0.35 -0.4 2,084,592 - BWI76_RS09910 0.36 +1.1 2,084,594 - BWI76_RS09910 0.36 -1.4 2,084,597 - BWI76_RS09910 0.36 -1.3 2,084,615 + BWI76_RS09910 0.38 -0.2 2,084,654 + BWI76_RS09910 0.42 -0.5 2,084,662 - BWI76_RS09910 0.43 -0.6 2,084,662 - BWI76_RS09910 0.43 -0.4 2,084,686 - BWI76_RS09910 0.45 -0.4 2,084,760 + BWI76_RS09910 0.53 -1.7 2,084,761 + BWI76_RS09910 0.53 +0.8 2,084,761 + BWI76_RS09910 0.53 +0.2 2,084,761 + BWI76_RS09910 0.53 -0.1 2,084,761 + BWI76_RS09910 0.53 -2.3 2,084,761 + BWI76_RS09910 0.53 -0.2 2,084,761 + BWI76_RS09910 0.53 +0.3 2,084,761 + BWI76_RS09910 0.53 -1.0 2,084,761 + BWI76_RS09910 0.53 -0.7 2,084,761 + BWI76_RS09910 0.53 -1.1 2,084,761 + BWI76_RS09910 0.53 -1.4 2,084,761 + BWI76_RS09910 0.53 -2.0 2,084,761 + BWI76_RS09910 0.53 -0.4 2,084,761 + BWI76_RS09910 0.53 -0.4 2,084,761 + BWI76_RS09910 0.53 -0.4 2,084,768 - BWI76_RS09910 0.53 -0.7 2,084,769 - BWI76_RS09910 0.53 +1.0 2,084,769 - BWI76_RS09910 0.53 +1.0 2,084,769 - BWI76_RS09910 0.53 +0.0 2,084,769 - BWI76_RS09910 0.53 -0.7 2,084,769 - BWI76_RS09910 0.53 +0.8 2,084,769 - BWI76_RS09910 0.53 -0.9 2,084,769 - BWI76_RS09910 0.53 -0.6 2,084,769 - BWI76_RS09910 0.53 -0.2 2,084,769 - BWI76_RS09910 0.53 -0.6 2,084,769 - BWI76_RS09910 0.53 +0.0 2,084,769 - BWI76_RS09910 0.53 -0.7 2,084,769 - BWI76_RS09910 0.53 -0.9 2,084,769 - BWI76_RS09910 0.53 -1.5 2,084,769 - BWI76_RS09910 0.53 -0.8 2,084,884 + BWI76_RS09910 0.65 +0.3 2,084,892 - BWI76_RS09910 0.66 +1.2 2,084,909 + BWI76_RS09910 0.67 -1.0 2,084,926 + BWI76_RS09910 0.69 -0.6 2,084,934 - BWI76_RS09910 0.70 +0.3 2,084,978 - BWI76_RS09910 0.74 -1.0 2,084,987 + BWI76_RS09910 0.75 -0.4 2,084,987 + BWI76_RS09910 0.75 -0.4 2,084,993 + BWI76_RS09910 0.76 -0.7 2,084,995 + BWI76_RS09910 0.76 -0.1 2,084,995 - BWI76_RS09910 0.76 -0.5 2,085,017 - BWI76_RS09910 0.78 +1.6 2,085,023 + BWI76_RS09910 0.79 -0.7 2,085,033 + BWI76_RS09910 0.80 +0.3 2,085,033 + BWI76_RS09910 0.80 -1.1 2,085,036 - BWI76_RS09910 0.80 -0.4 2,085,044 + BWI76_RS09910 0.81 -0.3 2,085,044 + BWI76_RS09910 0.81 -0.5 2,085,044 + BWI76_RS09910 0.81 -0.6 2,085,044 + BWI76_RS09910 0.81 -0.5 2,085,044 + BWI76_RS09910 0.81 -1.2 2,085,052 - BWI76_RS09910 0.81 -0.1 2,085,118 + BWI76_RS09910 0.88 -1.1 2,085,126 - BWI76_RS09910 0.89 -0.8 2,085,131 - +0.8 2,085,151 - -0.8 2,085,155 + -0.4 2,085,160 + +0.3 2,085,168 - -0.7 2,085,168 - +2.2 2,085,168 - +0.6 2,085,171 + -1.2 2,085,233 + +1.5 2,085,233 + -0.2 2,085,241 - +0.1 2,085,359 - -0.2 2,085,361 - -0.4 2,085,397 - -0.5 2,085,413 + -0.2 2,085,421 - +1.5 2,085,441 - -1.2 2,085,453 + -0.8 2,085,453 + -0.2 2,085,453 + -0.4 2,085,461 - -1.3 2,085,512 - BWI76_RS09915 0.19 -1.5 2,085,528 + BWI76_RS09915 0.22 -1.1 2,085,570 + BWI76_RS09915 0.30 -0.3 2,085,612 - BWI76_RS09915 0.38 -0.7 2,085,698 + BWI76_RS09915 0.53 -0.9 2,085,698 + BWI76_RS09915 0.53 -0.9 2,085,698 + BWI76_RS09915 0.53 -1.0 2,085,706 - BWI76_RS09915 0.55 -0.5 2,085,706 - BWI76_RS09915 0.55 -0.8 2,085,706 - BWI76_RS09915 0.55 -0.3 2,085,908 - -1.1 2,085,989 + -0.8 2,085,994 + -2.0 2,085,994 + -0.8 2,085,997 - +0.2 2,086,002 - -0.3 2,086,099 - BWI76_RS09920 0.14 -0.5 2,086,201 - BWI76_RS09920 0.23 -0.3 2,086,346 + BWI76_RS09920 0.36 -0.1 2,086,346 + BWI76_RS09920 0.36 -0.4 2,086,354 - BWI76_RS09920 0.37 +0.0 2,086,435 - BWI76_RS09920 0.44 -0.1 2,086,692 - BWI76_RS09920 0.67 -0.2 2,086,745 + BWI76_RS09920 0.72 -0.1 2,086,858 - BWI76_RS09920 0.82 -0.6 2,086,925 - BWI76_RS09920 0.88 -0.1
Or see this region's nucleotide sequence