Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09915

Experiment: A22 0.1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS09910 and BWI76_RS09915 are separated by 168 nucleotidesBWI76_RS09915 and BWI76_RS09920 overlap by 4 nucleotides BWI76_RS09910: BWI76_RS09910 - dihydroorotate dehydrogenase (quinone), at 2,084,229 to 2,085,239 _RS09910 BWI76_RS09915: BWI76_RS09915 - cell division protein ZapC, at 2,085,408 to 2,085,950 _RS09915 BWI76_RS09920: BWI76_RS09920 - hypothetical protein, at 2,085,947 to 2,087,056 _RS09920 Position (kb) 2085 2086Strain fitness (log2 ratio) -2 -1 0 1 2at 2084.445 kb on - strand, within BWI76_RS09910at 2084.504 kb on + strand, within BWI76_RS09910at 2084.518 kb on + strand, within BWI76_RS09910at 2084.527 kb on + strand, within BWI76_RS09910at 2084.527 kb on + strand, within BWI76_RS09910at 2084.550 kb on - strand, within BWI76_RS09910at 2084.579 kb on + strand, within BWI76_RS09910at 2084.579 kb on + strand, within BWI76_RS09910at 2084.579 kb on + strand, within BWI76_RS09910at 2084.586 kb on + strand, within BWI76_RS09910at 2084.586 kb on + strand, within BWI76_RS09910at 2084.592 kb on - strand, within BWI76_RS09910at 2084.594 kb on - strand, within BWI76_RS09910at 2084.597 kb on - strand, within BWI76_RS09910at 2084.615 kb on + strand, within BWI76_RS09910at 2084.654 kb on + strand, within BWI76_RS09910at 2084.662 kb on - strand, within BWI76_RS09910at 2084.662 kb on - strand, within BWI76_RS09910at 2084.686 kb on - strand, within BWI76_RS09910at 2084.760 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.768 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.884 kb on + strand, within BWI76_RS09910at 2084.892 kb on - strand, within BWI76_RS09910at 2084.909 kb on + strand, within BWI76_RS09910at 2084.926 kb on + strand, within BWI76_RS09910at 2084.934 kb on - strand, within BWI76_RS09910at 2084.978 kb on - strand, within BWI76_RS09910at 2084.987 kb on + strand, within BWI76_RS09910at 2084.987 kb on + strand, within BWI76_RS09910at 2084.993 kb on + strand, within BWI76_RS09910at 2084.995 kb on + strand, within BWI76_RS09910at 2084.995 kb on - strand, within BWI76_RS09910at 2085.017 kb on - strand, within BWI76_RS09910at 2085.023 kb on + strand, within BWI76_RS09910at 2085.033 kb on + strand, within BWI76_RS09910at 2085.033 kb on + strand, within BWI76_RS09910at 2085.036 kb on - strand, within BWI76_RS09910at 2085.044 kb on + strand, within BWI76_RS09910at 2085.044 kb on + strand, within BWI76_RS09910at 2085.044 kb on + strand, within BWI76_RS09910at 2085.044 kb on + strand, within BWI76_RS09910at 2085.044 kb on + strand, within BWI76_RS09910at 2085.052 kb on - strand, within BWI76_RS09910at 2085.118 kb on + strand, within BWI76_RS09910at 2085.126 kb on - strand, within BWI76_RS09910at 2085.131 kb on - strandat 2085.151 kb on - strandat 2085.155 kb on + strandat 2085.160 kb on + strandat 2085.168 kb on - strandat 2085.168 kb on - strandat 2085.168 kb on - strandat 2085.171 kb on + strandat 2085.233 kb on + strandat 2085.233 kb on + strandat 2085.241 kb on - strandat 2085.359 kb on - strandat 2085.361 kb on - strandat 2085.397 kb on - strandat 2085.413 kb on + strandat 2085.421 kb on - strandat 2085.441 kb on - strandat 2085.453 kb on + strandat 2085.453 kb on + strandat 2085.453 kb on + strandat 2085.461 kb on - strandat 2085.512 kb on - strand, within BWI76_RS09915at 2085.528 kb on + strand, within BWI76_RS09915at 2085.570 kb on + strand, within BWI76_RS09915at 2085.612 kb on - strand, within BWI76_RS09915at 2085.698 kb on + strand, within BWI76_RS09915at 2085.698 kb on + strand, within BWI76_RS09915at 2085.698 kb on + strand, within BWI76_RS09915at 2085.706 kb on - strand, within BWI76_RS09915at 2085.706 kb on - strand, within BWI76_RS09915at 2085.706 kb on - strand, within BWI76_RS09915at 2085.908 kb on - strandat 2085.989 kb on + strandat 2085.994 kb on + strandat 2085.994 kb on + strandat 2085.997 kb on - strandat 2086.002 kb on - strandat 2086.099 kb on - strand, within BWI76_RS09920at 2086.201 kb on - strand, within BWI76_RS09920at 2086.346 kb on + strand, within BWI76_RS09920at 2086.346 kb on + strand, within BWI76_RS09920at 2086.354 kb on - strand, within BWI76_RS09920at 2086.435 kb on - strand, within BWI76_RS09920at 2086.692 kb on - strand, within BWI76_RS09920at 2086.745 kb on + strand, within BWI76_RS09920at 2086.858 kb on - strand, within BWI76_RS09920at 2086.925 kb on - strand, within BWI76_RS09920

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Per-strain Table

Position Strand Gene LocusTag Fraction A22 0.1 mg/ml
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2,084,445 - BWI76_RS09910 0.21 +1.0
2,084,504 + BWI76_RS09910 0.27 -0.5
2,084,518 + BWI76_RS09910 0.29 -1.4
2,084,527 + BWI76_RS09910 0.29 -0.6
2,084,527 + BWI76_RS09910 0.29 -0.7
2,084,550 - BWI76_RS09910 0.32 -1.2
2,084,579 + BWI76_RS09910 0.35 -0.9
2,084,579 + BWI76_RS09910 0.35 -0.7
2,084,579 + BWI76_RS09910 0.35 -1.9
2,084,586 + BWI76_RS09910 0.35 -0.4
2,084,586 + BWI76_RS09910 0.35 -0.4
2,084,592 - BWI76_RS09910 0.36 +1.1
2,084,594 - BWI76_RS09910 0.36 -1.4
2,084,597 - BWI76_RS09910 0.36 -1.3
2,084,615 + BWI76_RS09910 0.38 -0.2
2,084,654 + BWI76_RS09910 0.42 -0.5
2,084,662 - BWI76_RS09910 0.43 -0.6
2,084,662 - BWI76_RS09910 0.43 -0.4
2,084,686 - BWI76_RS09910 0.45 -0.4
2,084,760 + BWI76_RS09910 0.53 -1.7
2,084,761 + BWI76_RS09910 0.53 +0.8
2,084,761 + BWI76_RS09910 0.53 +0.2
2,084,761 + BWI76_RS09910 0.53 -0.1
2,084,761 + BWI76_RS09910 0.53 -2.3
2,084,761 + BWI76_RS09910 0.53 -0.2
2,084,761 + BWI76_RS09910 0.53 +0.3
2,084,761 + BWI76_RS09910 0.53 -1.0
2,084,761 + BWI76_RS09910 0.53 -0.7
2,084,761 + BWI76_RS09910 0.53 -1.1
2,084,761 + BWI76_RS09910 0.53 -1.4
2,084,761 + BWI76_RS09910 0.53 -2.0
2,084,761 + BWI76_RS09910 0.53 -0.4
2,084,761 + BWI76_RS09910 0.53 -0.4
2,084,761 + BWI76_RS09910 0.53 -0.4
2,084,768 - BWI76_RS09910 0.53 -0.7
2,084,769 - BWI76_RS09910 0.53 +1.0
2,084,769 - BWI76_RS09910 0.53 +1.0
2,084,769 - BWI76_RS09910 0.53 +0.0
2,084,769 - BWI76_RS09910 0.53 -0.7
2,084,769 - BWI76_RS09910 0.53 +0.8
2,084,769 - BWI76_RS09910 0.53 -0.9
2,084,769 - BWI76_RS09910 0.53 -0.6
2,084,769 - BWI76_RS09910 0.53 -0.2
2,084,769 - BWI76_RS09910 0.53 -0.6
2,084,769 - BWI76_RS09910 0.53 +0.0
2,084,769 - BWI76_RS09910 0.53 -0.7
2,084,769 - BWI76_RS09910 0.53 -0.9
2,084,769 - BWI76_RS09910 0.53 -1.5
2,084,769 - BWI76_RS09910 0.53 -0.8
2,084,884 + BWI76_RS09910 0.65 +0.3
2,084,892 - BWI76_RS09910 0.66 +1.2
2,084,909 + BWI76_RS09910 0.67 -1.0
2,084,926 + BWI76_RS09910 0.69 -0.6
2,084,934 - BWI76_RS09910 0.70 +0.3
2,084,978 - BWI76_RS09910 0.74 -1.0
2,084,987 + BWI76_RS09910 0.75 -0.4
2,084,987 + BWI76_RS09910 0.75 -0.4
2,084,993 + BWI76_RS09910 0.76 -0.7
2,084,995 + BWI76_RS09910 0.76 -0.1
2,084,995 - BWI76_RS09910 0.76 -0.5
2,085,017 - BWI76_RS09910 0.78 +1.6
2,085,023 + BWI76_RS09910 0.79 -0.7
2,085,033 + BWI76_RS09910 0.80 +0.3
2,085,033 + BWI76_RS09910 0.80 -1.1
2,085,036 - BWI76_RS09910 0.80 -0.4
2,085,044 + BWI76_RS09910 0.81 -0.3
2,085,044 + BWI76_RS09910 0.81 -0.5
2,085,044 + BWI76_RS09910 0.81 -0.6
2,085,044 + BWI76_RS09910 0.81 -0.5
2,085,044 + BWI76_RS09910 0.81 -1.2
2,085,052 - BWI76_RS09910 0.81 -0.1
2,085,118 + BWI76_RS09910 0.88 -1.1
2,085,126 - BWI76_RS09910 0.89 -0.8
2,085,131 - +0.8
2,085,151 - -0.8
2,085,155 + -0.4
2,085,160 + +0.3
2,085,168 - -0.7
2,085,168 - +2.2
2,085,168 - +0.6
2,085,171 + -1.2
2,085,233 + +1.5
2,085,233 + -0.2
2,085,241 - +0.1
2,085,359 - -0.2
2,085,361 - -0.4
2,085,397 - -0.5
2,085,413 + -0.2
2,085,421 - +1.5
2,085,441 - -1.2
2,085,453 + -0.8
2,085,453 + -0.2
2,085,453 + -0.4
2,085,461 - -1.3
2,085,512 - BWI76_RS09915 0.19 -1.5
2,085,528 + BWI76_RS09915 0.22 -1.1
2,085,570 + BWI76_RS09915 0.30 -0.3
2,085,612 - BWI76_RS09915 0.38 -0.7
2,085,698 + BWI76_RS09915 0.53 -0.9
2,085,698 + BWI76_RS09915 0.53 -0.9
2,085,698 + BWI76_RS09915 0.53 -1.0
2,085,706 - BWI76_RS09915 0.55 -0.5
2,085,706 - BWI76_RS09915 0.55 -0.8
2,085,706 - BWI76_RS09915 0.55 -0.3
2,085,908 - -1.1
2,085,989 + -0.8
2,085,994 + -2.0
2,085,994 + -0.8
2,085,997 - +0.2
2,086,002 - -0.3
2,086,099 - BWI76_RS09920 0.14 -0.5
2,086,201 - BWI76_RS09920 0.23 -0.3
2,086,346 + BWI76_RS09920 0.36 -0.1
2,086,346 + BWI76_RS09920 0.36 -0.4
2,086,354 - BWI76_RS09920 0.37 +0.0
2,086,435 - BWI76_RS09920 0.44 -0.1
2,086,692 - BWI76_RS09920 0.67 -0.2
2,086,745 + BWI76_RS09920 0.72 -0.1
2,086,858 - BWI76_RS09920 0.82 -0.6
2,086,925 - BWI76_RS09920 0.88 -0.1

Or see this region's nucleotide sequence