Experiment: A22 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08660 and BWI76_RS08665 are separated by 221 nucleotides BWI76_RS08665 and BWI76_RS08670 are separated by 60 nucleotides BWI76_RS08670 and BWI76_RS08675 are separated by 134 nucleotides
BWI76_RS08660: BWI76_RS08660 - pyridoxal phosphatase, at 1,825,847 to 1,826,665
_RS08660
BWI76_RS08665: BWI76_RS08665 - 6-phosphogluconolactonase, at 1,826,887 to 1,827,882
_RS08665
BWI76_RS08670: BWI76_RS08670 - N-acetyltransferase, at 1,827,943 to 1,828,419
_RS08670
BWI76_RS08675: BWI76_RS08675 - GntR family transcriptional regulator, at 1,828,554 to 1,830,023
_RS08675
Position (kb)
1826
1827
1828 Strain fitness (log2 ratio)
-1
0
1 at 1825.928 kb on - strand at 1826.051 kb on + strand, within BWI76_RS08660 at 1826.065 kb on - strand, within BWI76_RS08660 at 1826.127 kb on + strand, within BWI76_RS08660 at 1826.205 kb on + strand, within BWI76_RS08660 at 1826.205 kb on + strand, within BWI76_RS08660 at 1826.351 kb on - strand, within BWI76_RS08660 at 1826.544 kb on + strand, within BWI76_RS08660 at 1826.647 kb on - strand at 1826.709 kb on - strand at 1826.714 kb on + strand at 1826.714 kb on + strand at 1827.049 kb on + strand, within BWI76_RS08665 at 1827.097 kb on + strand, within BWI76_RS08665 at 1827.097 kb on + strand, within BWI76_RS08665 at 1827.200 kb on + strand, within BWI76_RS08665 at 1827.543 kb on - strand, within BWI76_RS08665 at 1827.612 kb on + strand, within BWI76_RS08665 at 1827.730 kb on - strand, within BWI76_RS08665 at 1827.779 kb on + strand, within BWI76_RS08665 at 1828.018 kb on - strand, within BWI76_RS08670 at 1828.042 kb on - strand, within BWI76_RS08670 at 1828.240 kb on - strand, within BWI76_RS08670 at 1828.240 kb on - strand, within BWI76_RS08670 at 1828.298 kb on - strand, within BWI76_RS08670 at 1828.450 kb on + strand at 1828.450 kb on + strand at 1828.614 kb on + strand at 1828.632 kb on - strand at 1828.642 kb on - strand at 1828.705 kb on - strand, within BWI76_RS08675 at 1828.755 kb on + strand, within BWI76_RS08675
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.1 mg/ml remove 1,825,928 - +0.0 1,826,051 + BWI76_RS08660 0.25 -0.6 1,826,065 - BWI76_RS08660 0.27 +0.0 1,826,127 + BWI76_RS08660 0.34 +0.6 1,826,205 + BWI76_RS08660 0.44 +0.1 1,826,205 + BWI76_RS08660 0.44 +0.1 1,826,351 - BWI76_RS08660 0.62 -0.3 1,826,544 + BWI76_RS08660 0.85 -0.3 1,826,647 - +0.1 1,826,709 - -0.3 1,826,714 + -0.2 1,826,714 + +0.2 1,827,049 + BWI76_RS08665 0.16 -1.5 1,827,097 + BWI76_RS08665 0.21 +0.2 1,827,097 + BWI76_RS08665 0.21 -1.6 1,827,200 + BWI76_RS08665 0.31 -0.4 1,827,543 - BWI76_RS08665 0.66 -1.0 1,827,612 + BWI76_RS08665 0.73 -0.6 1,827,730 - BWI76_RS08665 0.85 -0.8 1,827,779 + BWI76_RS08665 0.90 +0.6 1,828,018 - BWI76_RS08670 0.16 +0.0 1,828,042 - BWI76_RS08670 0.21 -0.0 1,828,240 - BWI76_RS08670 0.62 +1.0 1,828,240 - BWI76_RS08670 0.62 -0.1 1,828,298 - BWI76_RS08670 0.74 -0.1 1,828,450 + +0.1 1,828,450 + -1.1 1,828,614 + +0.2 1,828,632 - +0.0 1,828,642 - -0.4 1,828,705 - BWI76_RS08675 0.10 +0.7 1,828,755 + BWI76_RS08675 0.14 +0.1
Or see this region's nucleotide sequence