Experiment: A22 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS05420 and BWI76_RS05425 are separated by 94 nucleotides BWI76_RS05425 and BWI76_RS05430 are separated by 84 nucleotides BWI76_RS05430 and BWI76_RS05435 are separated by 57 nucleotides
BWI76_RS05420: BWI76_RS05420 - MFS transporter, at 1,138,012 to 1,139,202
_RS05420
BWI76_RS05425: BWI76_RS05425 - EEP domain-containing protein, at 1,139,297 to 1,140,103
_RS05425
BWI76_RS05430: BWI76_RS05430 - UbiE/COQ5 family methyltransferase, at 1,140,188 to 1,140,958
_RS05430
BWI76_RS05435: BWI76_RS05435 - murein transglycosylase D, at 1,141,016 to 1,142,383
_RS05435
Position (kb)
1139
1140
1141 Strain fitness (log2 ratio)
-2
-1
0
1 at 1138.364 kb on + strand, within BWI76_RS05420 at 1138.421 kb on + strand, within BWI76_RS05420 at 1138.507 kb on - strand, within BWI76_RS05420 at 1138.532 kb on + strand, within BWI76_RS05420 at 1138.540 kb on - strand, within BWI76_RS05420 at 1138.597 kb on + strand, within BWI76_RS05420 at 1138.631 kb on + strand, within BWI76_RS05420 at 1138.714 kb on - strand, within BWI76_RS05420 at 1138.942 kb on - strand, within BWI76_RS05420 at 1138.982 kb on - strand, within BWI76_RS05420 at 1138.982 kb on - strand, within BWI76_RS05420 at 1139.093 kb on - strand at 1139.205 kb on - strand at 1139.242 kb on + strand at 1139.367 kb on - strand at 1139.456 kb on + strand, within BWI76_RS05425 at 1139.801 kb on - strand, within BWI76_RS05425 at 1139.890 kb on - strand, within BWI76_RS05425 at 1140.133 kb on + strand at 1140.211 kb on - strand at 1140.243 kb on + strand at 1140.251 kb on - strand at 1140.256 kb on - strand at 1140.481 kb on + strand, within BWI76_RS05430 at 1140.540 kb on + strand, within BWI76_RS05430 at 1140.752 kb on - strand, within BWI76_RS05430 at 1141.076 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.1 mg/ml remove 1,138,364 + BWI76_RS05420 0.30 -0.7 1,138,421 + BWI76_RS05420 0.34 +0.3 1,138,507 - BWI76_RS05420 0.42 +0.2 1,138,532 + BWI76_RS05420 0.44 -0.2 1,138,540 - BWI76_RS05420 0.44 -0.2 1,138,597 + BWI76_RS05420 0.49 +0.2 1,138,631 + BWI76_RS05420 0.52 -0.4 1,138,714 - BWI76_RS05420 0.59 -0.3 1,138,942 - BWI76_RS05420 0.78 +0.3 1,138,982 - BWI76_RS05420 0.81 -0.0 1,138,982 - BWI76_RS05420 0.81 +1.4 1,139,093 - +0.4 1,139,205 - -1.3 1,139,242 + +1.5 1,139,367 - +0.3 1,139,456 + BWI76_RS05425 0.20 -0.8 1,139,801 - BWI76_RS05425 0.62 -2.3 1,139,890 - BWI76_RS05425 0.73 -0.7 1,140,133 + +0.4 1,140,211 - +0.7 1,140,243 + +0.8 1,140,251 - +0.0 1,140,256 - -0.2 1,140,481 + BWI76_RS05430 0.38 -0.3 1,140,540 + BWI76_RS05430 0.46 -0.9 1,140,752 - BWI76_RS05430 0.73 +0.2 1,141,076 - +0.3
Or see this region's nucleotide sequence