Experiment: A22 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS05190 and BWI76_RS05195 are separated by 107 nucleotides BWI76_RS05195 and BWI76_RS05200 are separated by 34 nucleotides BWI76_RS05200 and BWI76_RS05205 are separated by 131 nucleotides
BWI76_RS05190: BWI76_RS05190 - hypothetical protein, at 1,092,432 to 1,092,821
_RS05190
BWI76_RS05195: BWI76_RS05195 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, at 1,092,929 to 1,093,753
_RS05195
BWI76_RS05200: BWI76_RS05200 - bifunctional uridylyltransferase/uridylyl-removing protein, at 1,093,788 to 1,096,451
_RS05200
BWI76_RS05205: BWI76_RS05205 - type I methionyl aminopeptidase, at 1,096,583 to 1,097,377
_RS05205
Position (kb)
1093
1094
1095
1096
1097 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1092.789 kb on + strand at 1092.794 kb on + strand at 1092.802 kb on - strand at 1092.818 kb on + strand at 1092.837 kb on - strand at 1092.927 kb on + strand at 1093.792 kb on + strand at 1094.586 kb on - strand, within BWI76_RS05200 at 1094.801 kb on + strand, within BWI76_RS05200 at 1094.801 kb on + strand, within BWI76_RS05200 at 1094.834 kb on + strand, within BWI76_RS05200 at 1094.842 kb on - strand, within BWI76_RS05200 at 1095.761 kb on + strand, within BWI76_RS05200 at 1095.949 kb on - strand, within BWI76_RS05200 at 1096.423 kb on - strand at 1096.437 kb on - strand at 1096.654 kb on - strand at 1096.672 kb on + strand, within BWI76_RS05205 at 1096.689 kb on - strand, within BWI76_RS05205 at 1096.786 kb on - strand, within BWI76_RS05205 at 1096.826 kb on - strand, within BWI76_RS05205 at 1096.826 kb on - strand, within BWI76_RS05205 at 1096.840 kb on - strand, within BWI76_RS05205 at 1096.988 kb on - strand, within BWI76_RS05205 at 1097.052 kb on - strand, within BWI76_RS05205
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.1 mg/ml remove 1,092,789 + -0.5 1,092,794 + +1.0 1,092,802 - -0.9 1,092,818 + +0.9 1,092,837 - +0.2 1,092,927 + -0.2 1,093,792 + -3.1 1,094,586 - BWI76_RS05200 0.30 -0.0 1,094,801 + BWI76_RS05200 0.38 +0.4 1,094,801 + BWI76_RS05200 0.38 -0.1 1,094,834 + BWI76_RS05200 0.39 -0.9 1,094,842 - BWI76_RS05200 0.40 -1.1 1,095,761 + BWI76_RS05200 0.74 -0.4 1,095,949 - BWI76_RS05200 0.81 -1.7 1,096,423 - -0.4 1,096,437 - -0.1 1,096,654 - +1.3 1,096,672 + BWI76_RS05205 0.11 +1.7 1,096,689 - BWI76_RS05205 0.13 -0.2 1,096,786 - BWI76_RS05205 0.26 -1.6 1,096,826 - BWI76_RS05205 0.31 +0.4 1,096,826 - BWI76_RS05205 0.31 +0.6 1,096,840 - BWI76_RS05205 0.32 +0.5 1,096,988 - BWI76_RS05205 0.51 +0.5 1,097,052 - BWI76_RS05205 0.59 +0.6
Or see this region's nucleotide sequence