Experiment: A22 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04705 and BWI76_RS04710 are separated by 444 nucleotides BWI76_RS04710 and BWI76_RS04715 overlap by 2 nucleotides BWI76_RS04715 and BWI76_RS04720 are separated by 1 nucleotides BWI76_RS04720 and BWI76_RS04725 overlap by 4 nucleotides
BWI76_RS04705: BWI76_RS04705 - DNA-binding transcriptional regulator FruR, at 982,295 to 983,299
_RS04705
BWI76_RS04710: BWI76_RS04710 - hypothetical protein, at 983,744 to 983,926
_RS04710
BWI76_RS04715: BWI76_RS04715 - division/cell wall cluster transcriptional repressor MraZ, at 983,925 to 984,383
_RS04715
BWI76_RS04720: BWI76_RS04720 - 16S rRNA (cytosine(1402)-N(4))-methyltransferase, at 984,385 to 985,326
_RS04720
BWI76_RS04725: BWI76_RS04725 - cell division protein FtsL, at 985,323 to 985,688
_RS04725
Position (kb)
983
984
985 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 983.020 kb on + strand, within BWI76_RS04705 at 983.028 kb on - strand, within BWI76_RS04705 at 983.066 kb on - strand, within BWI76_RS04705 at 983.186 kb on - strand, within BWI76_RS04705 at 983.251 kb on - strand at 983.265 kb on + strand at 983.282 kb on + strand at 983.297 kb on - strand at 983.318 kb on - strand at 983.324 kb on + strand at 983.344 kb on - strand at 983.346 kb on - strand at 983.393 kb on - strand at 983.414 kb on - strand at 983.474 kb on + strand at 983.482 kb on - strand at 983.554 kb on + strand at 983.565 kb on + strand at 983.572 kb on + strand at 983.572 kb on + strand at 983.572 kb on + strand at 983.572 kb on + strand at 983.572 kb on + strand at 983.572 kb on + strand at 983.573 kb on - strand at 983.574 kb on + strand at 983.575 kb on + strand at 983.577 kb on + strand at 983.577 kb on + strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.582 kb on - strand at 983.619 kb on + strand at 983.626 kb on - strand at 983.627 kb on - strand at 983.636 kb on - strand at 983.637 kb on + strand at 983.638 kb on + strand at 983.670 kb on - strand at 983.710 kb on + strand at 983.718 kb on - strand at 983.824 kb on + strand, within BWI76_RS04710 at 983.826 kb on + strand, within BWI76_RS04710 at 983.834 kb on - strand, within BWI76_RS04710 at 983.849 kb on - strand, within BWI76_RS04710 at 983.922 kb on + strand at 984.062 kb on + strand, within BWI76_RS04715 at 984.335 kb on + strand, within BWI76_RS04715
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.1 mg/ml remove 983,020 + BWI76_RS04705 0.72 -1.6 983,028 - BWI76_RS04705 0.73 -1.1 983,066 - BWI76_RS04705 0.77 -2.9 983,186 - BWI76_RS04705 0.89 -0.9 983,251 - +0.4 983,265 + -0.6 983,282 + -0.1 983,297 - -1.1 983,318 - +2.2 983,324 + -0.3 983,344 - -0.2 983,346 - -2.2 983,393 - +1.1 983,414 - +0.6 983,474 + -1.1 983,482 - +0.0 983,554 + -0.4 983,565 + -0.4 983,572 + -0.4 983,572 + +0.0 983,572 + -0.6 983,572 + -0.4 983,572 + -0.9 983,572 + -0.6 983,573 - -0.6 983,574 + -0.9 983,575 + -0.1 983,577 + -0.5 983,577 + -0.3 983,580 - -0.6 983,580 - +0.4 983,580 - -0.4 983,580 - -0.8 983,580 - -0.7 983,580 - -0.4 983,580 - -0.1 983,580 - +0.0 983,580 - -0.3 983,580 - -0.1 983,580 - -0.5 983,580 - -0.1 983,580 - -0.5 983,582 - -0.2 983,619 + -0.8 983,626 - -0.7 983,627 - +0.5 983,636 - +0.9 983,637 + -1.0 983,638 + -1.0 983,670 - +0.5 983,710 + -0.7 983,718 - -0.1 983,824 + BWI76_RS04710 0.44 -0.7 983,826 + BWI76_RS04710 0.45 -2.9 983,834 - BWI76_RS04710 0.49 -1.2 983,849 - BWI76_RS04710 0.57 +0.6 983,922 + -2.8 984,062 + BWI76_RS04715 0.30 -1.8 984,335 + BWI76_RS04715 0.89 -1.7
Or see this region's nucleotide sequence