Experiment: A22 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04695 and BWI76_RS04700 are separated by 2 nucleotides BWI76_RS04700 and BWI76_RS04705 are separated by 180 nucleotides BWI76_RS04705 and BWI76_RS04710 are separated by 444 nucleotides BWI76_RS04710 and BWI76_RS04715 overlap by 2 nucleotides
BWI76_RS04695: BWI76_RS04695 - acetolactate synthase 3 large subunit, at 979,896 to 981,620
_RS04695
BWI76_RS04700: BWI76_RS04700 - acetolactate synthase small subunit, at 981,623 to 982,114
_RS04700
BWI76_RS04705: BWI76_RS04705 - DNA-binding transcriptional regulator FruR, at 982,295 to 983,299
_RS04705
BWI76_RS04710: BWI76_RS04710 - hypothetical protein, at 983,744 to 983,926
_RS04710
BWI76_RS04715: BWI76_RS04715 - division/cell wall cluster transcriptional repressor MraZ, at 983,925 to 984,383
_RS04715
Position (kb) 982
983
984 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 981.303 kb on + strand, within BWI76_RS04695 at 981.351 kb on + strand, within BWI76_RS04695 at 981.364 kb on - strand, within BWI76_RS04695 at 981.388 kb on - strand, within BWI76_RS04695 at 981.388 kb on - strand, within BWI76_RS04695 at 981.542 kb on - strand at 981.551 kb on + strand at 981.551 kb on + strand at 981.551 kb on + strand at 981.559 kb on - strand at 981.593 kb on - strand at 981.617 kb on - strand at 981.665 kb on + strand at 981.801 kb on + strand, within BWI76_RS04700 at 981.884 kb on - strand, within BWI76_RS04700 at 982.063 kb on + strand, within BWI76_RS04700 at 982.068 kb on + strand at 982.222 kb on + strand at 982.222 kb on + strand at 982.340 kb on + strand at 982.631 kb on + strand, within BWI76_RS04705 at 982.647 kb on - strand, within BWI76_RS04705 at 982.684 kb on - strand, within BWI76_RS04705 at 982.730 kb on + strand, within BWI76_RS04705 at 982.730 kb on + strand, within BWI76_RS04705 at 982.757 kb on + strand, within BWI76_RS04705 at 982.789 kb on - strand, within BWI76_RS04705 at 983.020 kb on + strand, within BWI76_RS04705 at 983.028 kb on - strand, within BWI76_RS04705 at 983.066 kb on - strand, within BWI76_RS04705 at 983.186 kb on - strand, within BWI76_RS04705 at 983.251 kb on - strand at 983.265 kb on + strand at 983.282 kb on + strand at 983.297 kb on - strand at 983.318 kb on - strand at 983.324 kb on + strand at 983.344 kb on - strand at 983.346 kb on - strand at 983.393 kb on - strand at 983.414 kb on - strand at 983.474 kb on + strand at 983.482 kb on - strand at 983.554 kb on + strand at 983.565 kb on + strand at 983.572 kb on + strand at 983.572 kb on + strand at 983.572 kb on + strand at 983.572 kb on + strand at 983.572 kb on + strand at 983.572 kb on + strand at 983.573 kb on - strand at 983.574 kb on + strand at 983.575 kb on + strand at 983.577 kb on + strand at 983.577 kb on + strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.582 kb on - strand at 983.619 kb on + strand at 983.626 kb on - strand at 983.627 kb on - strand at 983.636 kb on - strand at 983.637 kb on + strand at 983.638 kb on + strand at 983.670 kb on - strand at 983.710 kb on + strand at 983.718 kb on - strand at 983.824 kb on + strand, within BWI76_RS04710 at 983.826 kb on + strand, within BWI76_RS04710 at 983.834 kb on - strand, within BWI76_RS04710 at 983.849 kb on - strand, within BWI76_RS04710 at 983.922 kb on + strand at 984.062 kb on + strand, within BWI76_RS04715
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.1 mg/ml remove 981,303 + BWI76_RS04695 0.82 -0.5 981,351 + BWI76_RS04695 0.84 -0.8 981,364 - BWI76_RS04695 0.85 -2.5 981,388 - BWI76_RS04695 0.86 +0.8 981,388 - BWI76_RS04695 0.86 +1.1 981,542 - +0.8 981,551 + -0.8 981,551 + -0.5 981,551 + -0.5 981,559 - -0.3 981,593 - -0.5 981,617 - +1.9 981,665 + -0.9 981,801 + BWI76_RS04700 0.36 +0.8 981,884 - BWI76_RS04700 0.53 +0.1 982,063 + BWI76_RS04700 0.89 +0.2 982,068 + +0.0 982,222 + -0.3 982,222 + -0.1 982,340 + -1.3 982,631 + BWI76_RS04705 0.33 -1.3 982,647 - BWI76_RS04705 0.35 -0.6 982,684 - BWI76_RS04705 0.39 -0.8 982,730 + BWI76_RS04705 0.43 -1.3 982,730 + BWI76_RS04705 0.43 +0.7 982,757 + BWI76_RS04705 0.46 +0.5 982,789 - BWI76_RS04705 0.49 -0.2 983,020 + BWI76_RS04705 0.72 -1.6 983,028 - BWI76_RS04705 0.73 -1.1 983,066 - BWI76_RS04705 0.77 -2.9 983,186 - BWI76_RS04705 0.89 -0.9 983,251 - +0.4 983,265 + -0.6 983,282 + -0.1 983,297 - -1.1 983,318 - +2.2 983,324 + -0.3 983,344 - -0.2 983,346 - -2.2 983,393 - +1.1 983,414 - +0.6 983,474 + -1.1 983,482 - +0.0 983,554 + -0.4 983,565 + -0.4 983,572 + -0.4 983,572 + +0.0 983,572 + -0.6 983,572 + -0.4 983,572 + -0.9 983,572 + -0.6 983,573 - -0.6 983,574 + -0.9 983,575 + -0.1 983,577 + -0.5 983,577 + -0.3 983,580 - -0.6 983,580 - +0.4 983,580 - -0.4 983,580 - -0.8 983,580 - -0.7 983,580 - -0.4 983,580 - -0.1 983,580 - +0.0 983,580 - -0.3 983,580 - -0.1 983,580 - -0.5 983,580 - -0.1 983,580 - -0.5 983,582 - -0.2 983,619 + -0.8 983,626 - -0.7 983,627 - +0.5 983,636 - +0.9 983,637 + -1.0 983,638 + -1.0 983,670 - +0.5 983,710 + -0.7 983,718 - -0.1 983,824 + BWI76_RS04710 0.44 -0.7 983,826 + BWI76_RS04710 0.45 -2.9 983,834 - BWI76_RS04710 0.49 -1.2 983,849 - BWI76_RS04710 0.57 +0.6 983,922 + -2.8 984,062 + BWI76_RS04715 0.30 -1.8
Or see this region's nucleotide sequence