Experiment: A22 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03795 and BWI76_RS03800 are separated by 45 nucleotides BWI76_RS03800 and BWI76_RS03805 overlap by 1 nucleotides BWI76_RS03805 and BWI76_RS03810 are separated by 349 nucleotides
BWI76_RS03795: BWI76_RS03795 - putative aldehyde dehydrogenase, at 785,001 to 786,371
_RS03795
BWI76_RS03800: BWI76_RS03800 - hypothetical protein, at 786,417 to 786,737
_RS03800
BWI76_RS03805: BWI76_RS03805 - porin, at 786,737 to 787,282
_RS03805
BWI76_RS03810: BWI76_RS03810 - GTPase, at 787,632 to 788,588
_RS03810
Position (kb) 786
787 Strain fitness (log2 ratio) -1
0
1
2 at 785.468 kb on + strand, within BWI76_RS03795 at 785.610 kb on + strand, within BWI76_RS03795 at 785.610 kb on + strand, within BWI76_RS03795 at 785.618 kb on - strand, within BWI76_RS03795 at 785.664 kb on - strand, within BWI76_RS03795 at 785.720 kb on - strand, within BWI76_RS03795 at 785.778 kb on + strand, within BWI76_RS03795 at 785.791 kb on - strand, within BWI76_RS03795 at 785.811 kb on - strand, within BWI76_RS03795 at 785.951 kb on + strand, within BWI76_RS03795 at 785.951 kb on + strand, within BWI76_RS03795 at 786.054 kb on - strand, within BWI76_RS03795 at 786.070 kb on + strand, within BWI76_RS03795 at 786.101 kb on + strand, within BWI76_RS03795 at 786.171 kb on + strand, within BWI76_RS03795 at 786.233 kb on + strand, within BWI76_RS03795 at 786.247 kb on + strand at 786.270 kb on - strand at 786.574 kb on + strand, within BWI76_RS03800 at 786.582 kb on - strand, within BWI76_RS03800 at 786.768 kb on - strand at 786.905 kb on + strand, within BWI76_RS03805 at 786.924 kb on + strand, within BWI76_RS03805 at 786.936 kb on + strand, within BWI76_RS03805 at 786.937 kb on - strand, within BWI76_RS03805 at 787.215 kb on + strand, within BWI76_RS03805 at 787.244 kb on + strand at 787.252 kb on - strand at 787.259 kb on - strand at 787.292 kb on - strand at 787.369 kb on - strand at 787.437 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.1 mg/ml remove 785,468 + BWI76_RS03795 0.34 +0.7 785,610 + BWI76_RS03795 0.44 -0.2 785,610 + BWI76_RS03795 0.44 -0.2 785,618 - BWI76_RS03795 0.45 -0.4 785,664 - BWI76_RS03795 0.48 -0.9 785,720 - BWI76_RS03795 0.52 -1.1 785,778 + BWI76_RS03795 0.57 -0.2 785,791 - BWI76_RS03795 0.58 +0.1 785,811 - BWI76_RS03795 0.59 -0.1 785,951 + BWI76_RS03795 0.69 -0.1 785,951 + BWI76_RS03795 0.69 -0.6 786,054 - BWI76_RS03795 0.77 +0.6 786,070 + BWI76_RS03795 0.78 +1.1 786,101 + BWI76_RS03795 0.80 +0.3 786,171 + BWI76_RS03795 0.85 -1.0 786,233 + BWI76_RS03795 0.90 -0.6 786,247 + -0.3 786,270 - +0.9 786,574 + BWI76_RS03800 0.49 +0.4 786,582 - BWI76_RS03800 0.51 +0.4 786,768 - -0.9 786,905 + BWI76_RS03805 0.31 +0.0 786,924 + BWI76_RS03805 0.34 +0.1 786,936 + BWI76_RS03805 0.36 -0.3 786,937 - BWI76_RS03805 0.37 -0.1 787,215 + BWI76_RS03805 0.88 +0.2 787,244 + -0.1 787,252 - -0.1 787,259 - -0.4 787,292 - -1.1 787,369 - +2.2 787,437 - -0.2
Or see this region's nucleotide sequence