Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS02550

Experiment: A22 0.1 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntBWI76_RS02545 and BWI76_RS02550 are separated by 2 nucleotidesBWI76_RS02550 and BWI76_RS02555 are separated by 63 nucleotidesBWI76_RS02555 and BWI76_RS02560 are separated by 218 nucleotidesBWI76_RS02560 and BWI76_RS02565 are separated by 102 nucleotides BWI76_RS02545: BWI76_RS02545 - protease modulator HflK, at 521,687 to 522,943 _RS02545 BWI76_RS02550: BWI76_RS02550 - protease modulator HflC, at 522,946 to 523,950 _RS02550 BWI76_RS02555: BWI76_RS02555 - hypothetical protein, at 524,014 to 524,304 _RS02555 BWI76_RS02560: BWI76_RS02560 - membrane protein, at 524,523 to 524,720 _RS02560 BWI76_RS02565: BWI76_RS02565 - adenylosuccinate synthase, at 524,823 to 526,121 _RS02565 Position (kb) 522 523 524Strain fitness (log2 ratio) -2 -1 0 1 2 3at 522.172 kb on - strand, within BWI76_RS02545at 522.186 kb on - strand, within BWI76_RS02545at 522.375 kb on + strand, within BWI76_RS02545at 522.375 kb on + strand, within BWI76_RS02545at 522.375 kb on + strand, within BWI76_RS02545at 522.383 kb on - strand, within BWI76_RS02545at 522.576 kb on - strand, within BWI76_RS02545at 522.592 kb on + strand, within BWI76_RS02545at 522.628 kb on + strand, within BWI76_RS02545at 522.628 kb on + strand, within BWI76_RS02545at 522.712 kb on + strand, within BWI76_RS02545at 522.898 kb on - strandat 523.054 kb on + strand, within BWI76_RS02550at 523.078 kb on + strand, within BWI76_RS02550at 523.078 kb on + strand, within BWI76_RS02550at 523.359 kb on - strand, within BWI76_RS02550at 523.388 kb on + strand, within BWI76_RS02550at 523.677 kb on - strand, within BWI76_RS02550at 523.828 kb on + strand, within BWI76_RS02550at 523.874 kb on + strandat 523.946 kb on + strandat 524.042 kb on + strandat 524.048 kb on + strand, within BWI76_RS02555at 524.067 kb on + strand, within BWI76_RS02555at 524.071 kb on + strand, within BWI76_RS02555at 524.125 kb on - strand, within BWI76_RS02555at 524.172 kb on + strand, within BWI76_RS02555at 524.180 kb on - strand, within BWI76_RS02555at 524.240 kb on + strandat 524.240 kb on + strand, within BWI76_RS02555at 524.240 kb on + strand, within BWI76_RS02555at 524.248 kb on - strand, within BWI76_RS02555at 524.259 kb on - strand, within BWI76_RS02555at 524.361 kb on - strandat 524.361 kb on - strandat 524.420 kb on + strandat 524.486 kb on + strandat 524.487 kb on + strandat 524.487 kb on + strandat 524.487 kb on + strandat 524.487 kb on + strandat 524.487 kb on + strandat 524.487 kb on + strandat 524.487 kb on + strandat 524.487 kb on + strandat 524.487 kb on + strandat 524.487 kb on + strandat 524.487 kb on + strandat 524.487 kb on + strandat 524.487 kb on + strandat 524.487 kb on + strandat 524.487 kb on + strandat 524.487 kb on + strandat 524.487 kb on + strandat 524.487 kb on + strandat 524.487 kb on + strandat 524.487 kb on + strandat 524.487 kb on + strandat 524.487 kb on + strandat 524.487 kb on + strandat 524.487 kb on + strandat 524.487 kb on + strandat 524.487 kb on + strandat 524.487 kb on + strandat 524.492 kb on + strandat 524.492 kb on + strandat 524.492 kb on + strandat 524.492 kb on + strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.495 kb on - strandat 524.500 kb on - strandat 524.500 kb on - strandat 524.500 kb on - strandat 524.500 kb on - strandat 524.500 kb on - strandat 524.500 kb on - strandat 524.500 kb on - strandat 524.500 kb on - strandat 524.555 kb on + strand, within BWI76_RS02560at 524.555 kb on + strand, within BWI76_RS02560at 524.556 kb on + strand, within BWI76_RS02560at 524.564 kb on - strand, within BWI76_RS02560at 524.580 kb on - strand, within BWI76_RS02560at 524.585 kb on + strand, within BWI76_RS02560at 524.721 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction A22 0.1 mg/ml
remove
522,172 - BWI76_RS02545 0.39 -0.7
522,186 - BWI76_RS02545 0.40 -1.1
522,375 + BWI76_RS02545 0.55 -0.9
522,375 + BWI76_RS02545 0.55 -0.0
522,375 + BWI76_RS02545 0.55 -1.1
522,383 - BWI76_RS02545 0.55 -0.4
522,576 - BWI76_RS02545 0.71 -0.5
522,592 + BWI76_RS02545 0.72 -0.6
522,628 + BWI76_RS02545 0.75 -0.2
522,628 + BWI76_RS02545 0.75 -0.6
522,712 + BWI76_RS02545 0.82 -0.1
522,898 - -1.8
523,054 + BWI76_RS02550 0.11 -0.1
523,078 + BWI76_RS02550 0.13 -1.8
523,078 + BWI76_RS02550 0.13 -1.1
523,359 - BWI76_RS02550 0.41 -0.5
523,388 + BWI76_RS02550 0.44 -0.3
523,677 - BWI76_RS02550 0.73 -0.5
523,828 + BWI76_RS02550 0.88 -1.5
523,874 + -0.7
523,946 + -0.6
524,042 + -0.2
524,048 + BWI76_RS02555 0.12 +0.6
524,067 + BWI76_RS02555 0.18 -0.3
524,071 + BWI76_RS02555 0.20 -0.2
524,125 - BWI76_RS02555 0.38 -1.1
524,172 + BWI76_RS02555 0.54 +0.6
524,180 - BWI76_RS02555 0.57 -0.6
524,240 + +1.5
524,240 + BWI76_RS02555 0.78 +0.0
524,240 + BWI76_RS02555 0.78 -0.5
524,248 - BWI76_RS02555 0.80 -0.3
524,259 - BWI76_RS02555 0.84 -0.2
524,361 - +0.3
524,361 - -0.5
524,420 + -1.1
524,486 + +0.5
524,487 + +0.8
524,487 + +0.1
524,487 + +0.2
524,487 + +2.9
524,487 + +0.3
524,487 + -0.4
524,487 + -0.2
524,487 + -0.0
524,487 + +0.3
524,487 + -0.4
524,487 + +2.2
524,487 + +0.1
524,487 + -0.8
524,487 + +0.4
524,487 + -0.3
524,487 + -0.3
524,487 + +0.0
524,487 + +0.0
524,487 + -0.3
524,487 + -0.2
524,487 + -0.4
524,487 + -0.0
524,487 + +0.5
524,487 + -0.0
524,487 + -0.7
524,487 + +0.4
524,487 + -0.1
524,492 + -0.2
524,492 + +1.9
524,492 + -0.2
524,492 + -0.2
524,495 - +0.0
524,495 - +0.7
524,495 - +3.2
524,495 - -1.1
524,495 - +0.4
524,495 - -0.3
524,495 - -0.1
524,495 - -0.4
524,495 - +0.4
524,495 - -0.3
524,495 - -1.2
524,495 - +0.2
524,495 - +0.3
524,495 - -0.4
524,495 - -0.4
524,495 - -0.1
524,495 - -0.5
524,495 - +0.9
524,495 - -0.4
524,495 - -0.5
524,495 - -0.9
524,495 - -0.1
524,495 - -0.3
524,495 - -0.3
524,495 - +0.6
524,495 - +0.0
524,495 - +0.4
524,495 - -0.4
524,495 - +0.1
524,495 - -0.5
524,495 - +0.7
524,495 - +0.9
524,500 - +0.4
524,500 - -0.4
524,500 - -0.1
524,500 - -0.0
524,500 - -0.1
524,500 - +1.0
524,500 - +0.1
524,500 - -1.4
524,555 + BWI76_RS02560 0.16 -0.1
524,555 + BWI76_RS02560 0.16 -0.7
524,556 + BWI76_RS02560 0.17 +0.4
524,564 - BWI76_RS02560 0.21 -0.1
524,580 - BWI76_RS02560 0.29 +0.4
524,585 + BWI76_RS02560 0.31 +1.8
524,721 + +0.4

Or see this region's nucleotide sequence