Experiment: A22 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02405 and BWI76_RS02410 are separated by 159 nucleotides BWI76_RS02410 and BWI76_RS02415 are separated by 42 nucleotides BWI76_RS02415 and BWI76_RS02420 are separated by 70 nucleotides BWI76_RS02420 and BWI76_RS02425 are separated by 163 nucleotides
BWI76_RS02405: BWI76_RS02405 - CadC family transcriptional regulator, at 496,163 to 496,726
_RS02405
BWI76_RS02410: BWI76_RS02410 - EF-P beta-lysylation protein EpmB, at 496,886 to 497,914
_RS02410
BWI76_RS02415: BWI76_RS02415 - elongation factor P, at 497,957 to 498,523
_RS02415
BWI76_RS02420: BWI76_RS02420 - entericidin EcnAB, at 498,594 to 498,728
_RS02420
BWI76_RS02425: BWI76_RS02425 - entericidin B, at 498,892 to 499,038
_RS02425
Position (kb)
496
497
498 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 496.067 kb on + strand at 496.067 kb on + strand at 496.108 kb on + strand at 496.113 kb on + strand at 496.153 kb on + strand at 496.153 kb on + strand at 496.153 kb on + strand at 496.158 kb on + strand at 496.229 kb on - strand, within BWI76_RS02405 at 496.229 kb on - strand, within BWI76_RS02405 at 496.235 kb on + strand, within BWI76_RS02405 at 496.243 kb on + strand, within BWI76_RS02405 at 496.243 kb on + strand, within BWI76_RS02405 at 496.243 kb on + strand, within BWI76_RS02405 at 496.243 kb on + strand, within BWI76_RS02405 at 496.245 kb on + strand, within BWI76_RS02405 at 496.245 kb on + strand, within BWI76_RS02405 at 496.245 kb on + strand, within BWI76_RS02405 at 496.253 kb on - strand, within BWI76_RS02405 at 496.256 kb on + strand, within BWI76_RS02405 at 496.256 kb on + strand, within BWI76_RS02405 at 496.264 kb on - strand, within BWI76_RS02405 at 496.264 kb on - strand, within BWI76_RS02405 at 496.281 kb on + strand, within BWI76_RS02405 at 496.281 kb on + strand, within BWI76_RS02405 at 496.281 kb on + strand, within BWI76_RS02405 at 496.281 kb on + strand, within BWI76_RS02405 at 496.281 kb on + strand, within BWI76_RS02405 at 496.281 kb on + strand at 496.281 kb on + strand, within BWI76_RS02405 at 496.281 kb on + strand, within BWI76_RS02405 at 496.281 kb on + strand, within BWI76_RS02405 at 496.281 kb on + strand, within BWI76_RS02405 at 496.281 kb on + strand, within BWI76_RS02405 at 496.289 kb on - strand, within BWI76_RS02405 at 496.289 kb on - strand, within BWI76_RS02405 at 496.289 kb on - strand, within BWI76_RS02405 at 496.289 kb on - strand, within BWI76_RS02405 at 496.289 kb on - strand, within BWI76_RS02405 at 496.289 kb on - strand, within BWI76_RS02405 at 496.289 kb on - strand, within BWI76_RS02405 at 496.289 kb on - strand, within BWI76_RS02405 at 496.289 kb on - strand, within BWI76_RS02405 at 496.289 kb on - strand, within BWI76_RS02405 at 496.291 kb on - strand, within BWI76_RS02405 at 496.313 kb on + strand, within BWI76_RS02405 at 496.313 kb on + strand, within BWI76_RS02405 at 496.321 kb on - strand, within BWI76_RS02405 at 496.321 kb on - strand, within BWI76_RS02405 at 496.322 kb on + strand, within BWI76_RS02405 at 496.438 kb on + strand, within BWI76_RS02405 at 496.452 kb on + strand, within BWI76_RS02405 at 496.452 kb on + strand, within BWI76_RS02405 at 496.452 kb on + strand, within BWI76_RS02405 at 496.454 kb on + strand, within BWI76_RS02405 at 496.460 kb on - strand, within BWI76_RS02405 at 496.460 kb on - strand, within BWI76_RS02405 at 496.460 kb on - strand, within BWI76_RS02405 at 496.462 kb on - strand, within BWI76_RS02405 at 496.467 kb on + strand, within BWI76_RS02405 at 496.560 kb on + strand, within BWI76_RS02405 at 496.560 kb on + strand, within BWI76_RS02405 at 496.560 kb on + strand, within BWI76_RS02405 at 496.573 kb on - strand, within BWI76_RS02405 at 496.584 kb on + strand, within BWI76_RS02405 at 496.584 kb on + strand, within BWI76_RS02405 at 496.592 kb on + strand, within BWI76_RS02405 at 496.592 kb on + strand, within BWI76_RS02405 at 496.594 kb on + strand, within BWI76_RS02405 at 496.594 kb on + strand, within BWI76_RS02405 at 496.594 kb on + strand, within BWI76_RS02405 at 496.594 kb on + strand, within BWI76_RS02405 at 496.602 kb on - strand, within BWI76_RS02405 at 496.624 kb on - strand, within BWI76_RS02405 at 496.649 kb on + strand, within BWI76_RS02405 at 496.649 kb on + strand, within BWI76_RS02405 at 496.649 kb on + strand, within BWI76_RS02405 at 496.649 kb on + strand, within BWI76_RS02405 at 496.649 kb on + strand, within BWI76_RS02405 at 496.649 kb on + strand, within BWI76_RS02405 at 496.649 kb on + strand, within BWI76_RS02405 at 496.649 kb on + strand, within BWI76_RS02405 at 496.649 kb on + strand, within BWI76_RS02405 at 496.649 kb on + strand, within BWI76_RS02405 at 496.649 kb on + strand, within BWI76_RS02405 at 496.649 kb on + strand, within BWI76_RS02405 at 496.649 kb on + strand, within BWI76_RS02405 at 496.649 kb on + strand, within BWI76_RS02405 at 496.649 kb on + strand, within BWI76_RS02405 at 496.649 kb on + strand, within BWI76_RS02405 at 496.649 kb on + strand, within BWI76_RS02405 at 496.649 kb on + strand, within BWI76_RS02405 at 496.657 kb on - strand, within BWI76_RS02405 at 496.657 kb on - strand, within BWI76_RS02405 at 496.657 kb on - strand, within BWI76_RS02405 at 496.657 kb on - strand, within BWI76_RS02405 at 496.657 kb on - strand, within BWI76_RS02405 at 496.657 kb on - strand, within BWI76_RS02405 at 496.657 kb on - strand, within BWI76_RS02405 at 496.657 kb on - strand, within BWI76_RS02405 at 496.657 kb on - strand, within BWI76_RS02405 at 496.682 kb on + strand at 496.682 kb on + strand at 496.741 kb on + strand at 496.772 kb on + strand at 496.801 kb on + strand at 496.811 kb on - strand at 496.819 kb on + strand at 496.819 kb on + strand at 496.819 kb on + strand at 496.827 kb on - strand at 496.831 kb on + strand at 496.835 kb on + strand at 496.841 kb on + strand at 496.844 kb on + strand at 496.844 kb on + strand at 496.844 kb on + strand at 496.844 kb on + strand at 496.846 kb on + strand at 496.852 kb on + strand at 496.852 kb on - strand at 496.852 kb on - strand at 496.856 kb on + strand at 496.856 kb on + strand at 496.856 kb on + strand at 496.856 kb on + strand at 496.860 kb on - strand at 496.862 kb on + strand at 496.879 kb on + strand at 496.879 kb on + strand at 496.902 kb on - strand at 497.562 kb on + strand, within BWI76_RS02410 at 497.624 kb on - strand, within BWI76_RS02410 at 498.557 kb on - strand at 498.561 kb on + strand at 498.563 kb on + strand at 498.569 kb on - strand at 498.573 kb on + strand at 498.573 kb on + strand at 498.640 kb on + strand, within BWI76_RS02420 at 498.640 kb on + strand, within BWI76_RS02420 at 498.648 kb on - strand, within BWI76_RS02420 at 498.656 kb on + strand, within BWI76_RS02420 at 498.729 kb on + strand at 498.740 kb on - strand at 498.765 kb on - strand at 498.826 kb on + strand at 498.871 kb on - strand at 498.890 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.1 mg/ml remove 496,067 + -0.4 496,067 + -0.8 496,108 + +0.2 496,113 + +0.6 496,153 + -0.8 496,153 + -2.2 496,153 + +0.3 496,158 + +0.9 496,229 - BWI76_RS02405 0.12 -0.7 496,229 - BWI76_RS02405 0.12 -0.0 496,235 + BWI76_RS02405 0.13 +2.5 496,243 + BWI76_RS02405 0.14 +0.6 496,243 + BWI76_RS02405 0.14 +0.0 496,243 + BWI76_RS02405 0.14 -0.7 496,243 + BWI76_RS02405 0.14 -0.7 496,245 + BWI76_RS02405 0.15 +0.1 496,245 + BWI76_RS02405 0.15 -0.4 496,245 + BWI76_RS02405 0.15 +0.7 496,253 - BWI76_RS02405 0.16 -0.4 496,256 + BWI76_RS02405 0.16 -0.9 496,256 + BWI76_RS02405 0.16 +0.2 496,264 - BWI76_RS02405 0.18 -0.1 496,264 - BWI76_RS02405 0.18 -2.3 496,281 + BWI76_RS02405 0.21 -0.9 496,281 + BWI76_RS02405 0.21 +0.9 496,281 + BWI76_RS02405 0.21 -0.7 496,281 + BWI76_RS02405 0.21 +0.3 496,281 + BWI76_RS02405 0.21 +0.3 496,281 + +1.3 496,281 + BWI76_RS02405 0.21 -0.4 496,281 + BWI76_RS02405 0.21 +0.7 496,281 + BWI76_RS02405 0.21 +0.5 496,281 + BWI76_RS02405 0.21 -1.8 496,281 + BWI76_RS02405 0.21 +0.8 496,289 - BWI76_RS02405 0.22 +0.6 496,289 - BWI76_RS02405 0.22 +0.9 496,289 - BWI76_RS02405 0.22 -0.0 496,289 - BWI76_RS02405 0.22 -1.1 496,289 - BWI76_RS02405 0.22 +0.8 496,289 - BWI76_RS02405 0.22 +0.4 496,289 - BWI76_RS02405 0.22 -2.4 496,289 - BWI76_RS02405 0.22 -1.3 496,289 - BWI76_RS02405 0.22 -0.7 496,289 - BWI76_RS02405 0.22 -0.7 496,291 - BWI76_RS02405 0.23 -0.7 496,313 + BWI76_RS02405 0.27 -0.1 496,313 + BWI76_RS02405 0.27 -0.9 496,321 - BWI76_RS02405 0.28 +0.6 496,321 - BWI76_RS02405 0.28 +0.0 496,322 + BWI76_RS02405 0.28 -0.7 496,438 + BWI76_RS02405 0.49 -2.1 496,452 + BWI76_RS02405 0.51 -0.5 496,452 + BWI76_RS02405 0.51 -0.8 496,452 + BWI76_RS02405 0.51 -0.0 496,454 + BWI76_RS02405 0.52 +0.4 496,460 - BWI76_RS02405 0.53 -1.3 496,460 - BWI76_RS02405 0.53 +0.3 496,460 - BWI76_RS02405 0.53 +0.1 496,462 - BWI76_RS02405 0.53 +0.5 496,467 + BWI76_RS02405 0.54 -1.4 496,560 + BWI76_RS02405 0.70 +0.2 496,560 + BWI76_RS02405 0.70 -0.7 496,560 + BWI76_RS02405 0.70 +0.4 496,573 - BWI76_RS02405 0.73 -1.5 496,584 + BWI76_RS02405 0.75 +0.0 496,584 + BWI76_RS02405 0.75 +0.4 496,592 + BWI76_RS02405 0.76 -0.5 496,592 + BWI76_RS02405 0.76 -0.4 496,594 + BWI76_RS02405 0.76 +0.8 496,594 + BWI76_RS02405 0.76 +0.4 496,594 + BWI76_RS02405 0.76 +0.2 496,594 + BWI76_RS02405 0.76 -1.0 496,602 - BWI76_RS02405 0.78 +0.7 496,624 - BWI76_RS02405 0.82 -0.9 496,649 + BWI76_RS02405 0.86 -0.1 496,649 + BWI76_RS02405 0.86 +0.4 496,649 + BWI76_RS02405 0.86 -0.3 496,649 + BWI76_RS02405 0.86 +0.2 496,649 + BWI76_RS02405 0.86 +1.9 496,649 + BWI76_RS02405 0.86 -0.3 496,649 + BWI76_RS02405 0.86 +0.4 496,649 + BWI76_RS02405 0.86 +0.5 496,649 + BWI76_RS02405 0.86 -1.0 496,649 + BWI76_RS02405 0.86 +0.4 496,649 + BWI76_RS02405 0.86 -1.2 496,649 + BWI76_RS02405 0.86 +1.2 496,649 + BWI76_RS02405 0.86 +0.2 496,649 + BWI76_RS02405 0.86 +0.3 496,649 + BWI76_RS02405 0.86 +0.7 496,649 + BWI76_RS02405 0.86 +0.4 496,649 + BWI76_RS02405 0.86 +0.5 496,649 + BWI76_RS02405 0.86 +0.3 496,657 - BWI76_RS02405 0.88 +0.4 496,657 - BWI76_RS02405 0.88 +0.1 496,657 - BWI76_RS02405 0.88 -0.4 496,657 - BWI76_RS02405 0.88 -0.7 496,657 - BWI76_RS02405 0.88 -0.4 496,657 - BWI76_RS02405 0.88 -0.5 496,657 - BWI76_RS02405 0.88 +0.0 496,657 - BWI76_RS02405 0.88 +2.2 496,657 - BWI76_RS02405 0.88 +1.9 496,682 + +0.1 496,682 + -0.2 496,741 + +0.0 496,772 + -0.4 496,801 + +0.3 496,811 - +0.4 496,819 + +1.5 496,819 + +0.6 496,819 + -0.4 496,827 - -0.2 496,831 + +0.5 496,835 + -0.2 496,841 + -1.1 496,844 + -2.1 496,844 + +0.7 496,844 + -0.1 496,844 + -1.4 496,846 + -0.2 496,852 + +0.4 496,852 - +0.9 496,852 - +0.1 496,856 + -0.8 496,856 + +0.5 496,856 + -0.7 496,856 + +0.3 496,860 - -1.2 496,862 + -0.4 496,879 + +0.2 496,879 + +0.6 496,902 - -0.1 497,562 + BWI76_RS02410 0.66 +0.9 497,624 - BWI76_RS02410 0.72 -0.9 498,557 - +0.2 498,561 + +0.5 498,563 + -0.5 498,569 - -0.1 498,573 + -1.5 498,573 + +0.4 498,640 + BWI76_RS02420 0.34 -0.9 498,640 + BWI76_RS02420 0.34 -0.0 498,648 - BWI76_RS02420 0.40 -1.1 498,656 + BWI76_RS02420 0.46 -0.1 498,729 + -1.1 498,740 - -2.3 498,765 - +0.2 498,826 + -0.1 498,871 - +0.7 498,890 - -1.1
Or see this region's nucleotide sequence