Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS02410

Experiment: A22 0.1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS02405 and BWI76_RS02410 are separated by 159 nucleotidesBWI76_RS02410 and BWI76_RS02415 are separated by 42 nucleotidesBWI76_RS02415 and BWI76_RS02420 are separated by 70 nucleotidesBWI76_RS02420 and BWI76_RS02425 are separated by 163 nucleotides BWI76_RS02405: BWI76_RS02405 - CadC family transcriptional regulator, at 496,163 to 496,726 _RS02405 BWI76_RS02410: BWI76_RS02410 - EF-P beta-lysylation protein EpmB, at 496,886 to 497,914 _RS02410 BWI76_RS02415: BWI76_RS02415 - elongation factor P, at 497,957 to 498,523 _RS02415 BWI76_RS02420: BWI76_RS02420 - entericidin EcnAB, at 498,594 to 498,728 _RS02420 BWI76_RS02425: BWI76_RS02425 - entericidin B, at 498,892 to 499,038 _RS02425 Position (kb) 496 497 498Strain fitness (log2 ratio) -2 -1 0 1 2at 496.067 kb on + strandat 496.067 kb on + strandat 496.108 kb on + strandat 496.113 kb on + strandat 496.153 kb on + strandat 496.153 kb on + strandat 496.153 kb on + strandat 496.158 kb on + strandat 496.229 kb on - strand, within BWI76_RS02405at 496.229 kb on - strand, within BWI76_RS02405at 496.235 kb on + strand, within BWI76_RS02405at 496.243 kb on + strand, within BWI76_RS02405at 496.243 kb on + strand, within BWI76_RS02405at 496.243 kb on + strand, within BWI76_RS02405at 496.243 kb on + strand, within BWI76_RS02405at 496.245 kb on + strand, within BWI76_RS02405at 496.245 kb on + strand, within BWI76_RS02405at 496.245 kb on + strand, within BWI76_RS02405at 496.253 kb on - strand, within BWI76_RS02405at 496.256 kb on + strand, within BWI76_RS02405at 496.256 kb on + strand, within BWI76_RS02405at 496.264 kb on - strand, within BWI76_RS02405at 496.264 kb on - strand, within BWI76_RS02405at 496.281 kb on + strand, within BWI76_RS02405at 496.281 kb on + strand, within BWI76_RS02405at 496.281 kb on + strand, within BWI76_RS02405at 496.281 kb on + strand, within BWI76_RS02405at 496.281 kb on + strand, within BWI76_RS02405at 496.281 kb on + strandat 496.281 kb on + strand, within BWI76_RS02405at 496.281 kb on + strand, within BWI76_RS02405at 496.281 kb on + strand, within BWI76_RS02405at 496.281 kb on + strand, within BWI76_RS02405at 496.281 kb on + strand, within BWI76_RS02405at 496.289 kb on - strand, within BWI76_RS02405at 496.289 kb on - strand, within BWI76_RS02405at 496.289 kb on - strand, within BWI76_RS02405at 496.289 kb on - strand, within BWI76_RS02405at 496.289 kb on - strand, within BWI76_RS02405at 496.289 kb on - strand, within BWI76_RS02405at 496.289 kb on - strand, within BWI76_RS02405at 496.289 kb on - strand, within BWI76_RS02405at 496.289 kb on - strand, within BWI76_RS02405at 496.289 kb on - strand, within BWI76_RS02405at 496.291 kb on - strand, within BWI76_RS02405at 496.313 kb on + strand, within BWI76_RS02405at 496.313 kb on + strand, within BWI76_RS02405at 496.321 kb on - strand, within BWI76_RS02405at 496.321 kb on - strand, within BWI76_RS02405at 496.322 kb on + strand, within BWI76_RS02405at 496.438 kb on + strand, within BWI76_RS02405at 496.452 kb on + strand, within BWI76_RS02405at 496.452 kb on + strand, within BWI76_RS02405at 496.452 kb on + strand, within BWI76_RS02405at 496.454 kb on + strand, within BWI76_RS02405at 496.460 kb on - strand, within BWI76_RS02405at 496.460 kb on - strand, within BWI76_RS02405at 496.460 kb on - strand, within BWI76_RS02405at 496.462 kb on - strand, within BWI76_RS02405at 496.467 kb on + strand, within BWI76_RS02405at 496.560 kb on + strand, within BWI76_RS02405at 496.560 kb on + strand, within BWI76_RS02405at 496.560 kb on + strand, within BWI76_RS02405at 496.573 kb on - strand, within BWI76_RS02405at 496.584 kb on + strand, within BWI76_RS02405at 496.584 kb on + strand, within BWI76_RS02405at 496.592 kb on + strand, within BWI76_RS02405at 496.592 kb on + strand, within BWI76_RS02405at 496.594 kb on + strand, within BWI76_RS02405at 496.594 kb on + strand, within BWI76_RS02405at 496.594 kb on + strand, within BWI76_RS02405at 496.594 kb on + strand, within BWI76_RS02405at 496.602 kb on - strand, within BWI76_RS02405at 496.624 kb on - strand, within BWI76_RS02405at 496.649 kb on + strand, within BWI76_RS02405at 496.649 kb on + strand, within BWI76_RS02405at 496.649 kb on + strand, within BWI76_RS02405at 496.649 kb on + strand, within BWI76_RS02405at 496.649 kb on + strand, within BWI76_RS02405at 496.649 kb on + strand, within BWI76_RS02405at 496.649 kb on + strand, within BWI76_RS02405at 496.649 kb on + strand, within BWI76_RS02405at 496.649 kb on + strand, within BWI76_RS02405at 496.649 kb on + strand, within BWI76_RS02405at 496.649 kb on + strand, within BWI76_RS02405at 496.649 kb on + strand, within BWI76_RS02405at 496.649 kb on + strand, within BWI76_RS02405at 496.649 kb on + strand, within BWI76_RS02405at 496.649 kb on + strand, within BWI76_RS02405at 496.649 kb on + strand, within BWI76_RS02405at 496.649 kb on + strand, within BWI76_RS02405at 496.649 kb on + strand, within BWI76_RS02405at 496.657 kb on - strand, within BWI76_RS02405at 496.657 kb on - strand, within BWI76_RS02405at 496.657 kb on - strand, within BWI76_RS02405at 496.657 kb on - strand, within BWI76_RS02405at 496.657 kb on - strand, within BWI76_RS02405at 496.657 kb on - strand, within BWI76_RS02405at 496.657 kb on - strand, within BWI76_RS02405at 496.657 kb on - strand, within BWI76_RS02405at 496.657 kb on - strand, within BWI76_RS02405at 496.682 kb on + strandat 496.682 kb on + strandat 496.741 kb on + strandat 496.772 kb on + strandat 496.801 kb on + strandat 496.811 kb on - strandat 496.819 kb on + strandat 496.819 kb on + strandat 496.819 kb on + strandat 496.827 kb on - strandat 496.831 kb on + strandat 496.835 kb on + strandat 496.841 kb on + strandat 496.844 kb on + strandat 496.844 kb on + strandat 496.844 kb on + strandat 496.844 kb on + strandat 496.846 kb on + strandat 496.852 kb on + strandat 496.852 kb on - strandat 496.852 kb on - strandat 496.856 kb on + strandat 496.856 kb on + strandat 496.856 kb on + strandat 496.856 kb on + strandat 496.860 kb on - strandat 496.862 kb on + strandat 496.879 kb on + strandat 496.879 kb on + strandat 496.902 kb on - strandat 497.562 kb on + strand, within BWI76_RS02410at 497.624 kb on - strand, within BWI76_RS02410at 498.557 kb on - strandat 498.561 kb on + strandat 498.563 kb on + strandat 498.569 kb on - strandat 498.573 kb on + strandat 498.573 kb on + strandat 498.640 kb on + strand, within BWI76_RS02420at 498.640 kb on + strand, within BWI76_RS02420at 498.648 kb on - strand, within BWI76_RS02420at 498.656 kb on + strand, within BWI76_RS02420at 498.729 kb on + strandat 498.740 kb on - strandat 498.765 kb on - strandat 498.826 kb on + strandat 498.871 kb on - strandat 498.890 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction A22 0.1 mg/ml
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496,067 + -0.4
496,067 + -0.8
496,108 + +0.2
496,113 + +0.6
496,153 + -0.8
496,153 + -2.2
496,153 + +0.3
496,158 + +0.9
496,229 - BWI76_RS02405 0.12 -0.7
496,229 - BWI76_RS02405 0.12 -0.0
496,235 + BWI76_RS02405 0.13 +2.5
496,243 + BWI76_RS02405 0.14 +0.6
496,243 + BWI76_RS02405 0.14 +0.0
496,243 + BWI76_RS02405 0.14 -0.7
496,243 + BWI76_RS02405 0.14 -0.7
496,245 + BWI76_RS02405 0.15 +0.1
496,245 + BWI76_RS02405 0.15 -0.4
496,245 + BWI76_RS02405 0.15 +0.7
496,253 - BWI76_RS02405 0.16 -0.4
496,256 + BWI76_RS02405 0.16 -0.9
496,256 + BWI76_RS02405 0.16 +0.2
496,264 - BWI76_RS02405 0.18 -0.1
496,264 - BWI76_RS02405 0.18 -2.3
496,281 + BWI76_RS02405 0.21 -0.9
496,281 + BWI76_RS02405 0.21 +0.9
496,281 + BWI76_RS02405 0.21 -0.7
496,281 + BWI76_RS02405 0.21 +0.3
496,281 + BWI76_RS02405 0.21 +0.3
496,281 + +1.3
496,281 + BWI76_RS02405 0.21 -0.4
496,281 + BWI76_RS02405 0.21 +0.7
496,281 + BWI76_RS02405 0.21 +0.5
496,281 + BWI76_RS02405 0.21 -1.8
496,281 + BWI76_RS02405 0.21 +0.8
496,289 - BWI76_RS02405 0.22 +0.6
496,289 - BWI76_RS02405 0.22 +0.9
496,289 - BWI76_RS02405 0.22 -0.0
496,289 - BWI76_RS02405 0.22 -1.1
496,289 - BWI76_RS02405 0.22 +0.8
496,289 - BWI76_RS02405 0.22 +0.4
496,289 - BWI76_RS02405 0.22 -2.4
496,289 - BWI76_RS02405 0.22 -1.3
496,289 - BWI76_RS02405 0.22 -0.7
496,289 - BWI76_RS02405 0.22 -0.7
496,291 - BWI76_RS02405 0.23 -0.7
496,313 + BWI76_RS02405 0.27 -0.1
496,313 + BWI76_RS02405 0.27 -0.9
496,321 - BWI76_RS02405 0.28 +0.6
496,321 - BWI76_RS02405 0.28 +0.0
496,322 + BWI76_RS02405 0.28 -0.7
496,438 + BWI76_RS02405 0.49 -2.1
496,452 + BWI76_RS02405 0.51 -0.5
496,452 + BWI76_RS02405 0.51 -0.8
496,452 + BWI76_RS02405 0.51 -0.0
496,454 + BWI76_RS02405 0.52 +0.4
496,460 - BWI76_RS02405 0.53 -1.3
496,460 - BWI76_RS02405 0.53 +0.3
496,460 - BWI76_RS02405 0.53 +0.1
496,462 - BWI76_RS02405 0.53 +0.5
496,467 + BWI76_RS02405 0.54 -1.4
496,560 + BWI76_RS02405 0.70 +0.2
496,560 + BWI76_RS02405 0.70 -0.7
496,560 + BWI76_RS02405 0.70 +0.4
496,573 - BWI76_RS02405 0.73 -1.5
496,584 + BWI76_RS02405 0.75 +0.0
496,584 + BWI76_RS02405 0.75 +0.4
496,592 + BWI76_RS02405 0.76 -0.5
496,592 + BWI76_RS02405 0.76 -0.4
496,594 + BWI76_RS02405 0.76 +0.8
496,594 + BWI76_RS02405 0.76 +0.4
496,594 + BWI76_RS02405 0.76 +0.2
496,594 + BWI76_RS02405 0.76 -1.0
496,602 - BWI76_RS02405 0.78 +0.7
496,624 - BWI76_RS02405 0.82 -0.9
496,649 + BWI76_RS02405 0.86 -0.1
496,649 + BWI76_RS02405 0.86 +0.4
496,649 + BWI76_RS02405 0.86 -0.3
496,649 + BWI76_RS02405 0.86 +0.2
496,649 + BWI76_RS02405 0.86 +1.9
496,649 + BWI76_RS02405 0.86 -0.3
496,649 + BWI76_RS02405 0.86 +0.4
496,649 + BWI76_RS02405 0.86 +0.5
496,649 + BWI76_RS02405 0.86 -1.0
496,649 + BWI76_RS02405 0.86 +0.4
496,649 + BWI76_RS02405 0.86 -1.2
496,649 + BWI76_RS02405 0.86 +1.2
496,649 + BWI76_RS02405 0.86 +0.2
496,649 + BWI76_RS02405 0.86 +0.3
496,649 + BWI76_RS02405 0.86 +0.7
496,649 + BWI76_RS02405 0.86 +0.4
496,649 + BWI76_RS02405 0.86 +0.5
496,649 + BWI76_RS02405 0.86 +0.3
496,657 - BWI76_RS02405 0.88 +0.4
496,657 - BWI76_RS02405 0.88 +0.1
496,657 - BWI76_RS02405 0.88 -0.4
496,657 - BWI76_RS02405 0.88 -0.7
496,657 - BWI76_RS02405 0.88 -0.4
496,657 - BWI76_RS02405 0.88 -0.5
496,657 - BWI76_RS02405 0.88 +0.0
496,657 - BWI76_RS02405 0.88 +2.2
496,657 - BWI76_RS02405 0.88 +1.9
496,682 + +0.1
496,682 + -0.2
496,741 + +0.0
496,772 + -0.4
496,801 + +0.3
496,811 - +0.4
496,819 + +1.5
496,819 + +0.6
496,819 + -0.4
496,827 - -0.2
496,831 + +0.5
496,835 + -0.2
496,841 + -1.1
496,844 + -2.1
496,844 + +0.7
496,844 + -0.1
496,844 + -1.4
496,846 + -0.2
496,852 + +0.4
496,852 - +0.9
496,852 - +0.1
496,856 + -0.8
496,856 + +0.5
496,856 + -0.7
496,856 + +0.3
496,860 - -1.2
496,862 + -0.4
496,879 + +0.2
496,879 + +0.6
496,902 - -0.1
497,562 + BWI76_RS02410 0.66 +0.9
497,624 - BWI76_RS02410 0.72 -0.9
498,557 - +0.2
498,561 + +0.5
498,563 + -0.5
498,569 - -0.1
498,573 + -1.5
498,573 + +0.4
498,640 + BWI76_RS02420 0.34 -0.9
498,640 + BWI76_RS02420 0.34 -0.0
498,648 - BWI76_RS02420 0.40 -1.1
498,656 + BWI76_RS02420 0.46 -0.1
498,729 + -1.1
498,740 - -2.3
498,765 - +0.2
498,826 + -0.1
498,871 - +0.7
498,890 - -1.1

Or see this region's nucleotide sequence