Experiment: MoLS4 with Chlorite 3.125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2246 and DvMF_2247 overlap by 14 nucleotides DvMF_2247 and DvMF_2248 are separated by 311 nucleotides DvMF_2248 and DvMF_2249 are separated by 402 nucleotides
DvMF_2246: DvMF_2246 - transcriptional regulator, LysR family (RefSeq), at 2,820,336 to 2,821,301
_2246
DvMF_2247: DvMF_2247 - channel protein, hemolysin III family (RefSeq), at 2,821,288 to 2,821,935
_2247
DvMF_2248: DvMF_2248 - signal recognition particle-docking protein FtsY (RefSeq), at 2,822,247 to 2,823,641
_2248
DvMF_2249: DvMF_2249 - signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq), at 2,824,044 to 2,826,359
_2249
Position (kb)
2822
2823
2824 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2821.256 kb on + strand at 2821.317 kb on - strand at 2821.655 kb on - strand, within DvMF_2247 at 2821.904 kb on - strand at 2822.203 kb on + strand at 2824.047 kb on + strand at 2824.288 kb on + strand, within DvMF_2249 at 2824.361 kb on - strand, within DvMF_2249 at 2824.365 kb on + strand, within DvMF_2249 at 2824.366 kb on - strand, within DvMF_2249 at 2824.462 kb on - strand, within DvMF_2249
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Chlorite 3.125 mM remove 2,821,256 + -0.3 2,821,317 - -1.4 2,821,655 - DvMF_2247 0.57 -3.2 2,821,904 - -0.2 2,822,203 + -0.3 2,824,047 + +0.6 2,824,288 + DvMF_2249 0.11 +1.1 2,824,361 - DvMF_2249 0.14 +1.5 2,824,365 + DvMF_2249 0.14 +1.4 2,824,366 - DvMF_2249 0.14 +1.2 2,824,462 - DvMF_2249 0.18 +1.3
Or see this region's nucleotide sequence