Experiment: MoLS4 with Chlorite 3.125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1620 and DvMF_1621 are separated by 143 nucleotides DvMF_1621 and DvMF_1622 are separated by 345 nucleotides
DvMF_1620: DvMF_1620 - flagellar hook-associated protein 3 (RefSeq), at 1,996,482 to 1,997,975
_1620
DvMF_1621: DvMF_1621 - flagellar hook-associated protein 2 domain protein (RefSeq), at 1,998,119 to 1,999,858
_1621
DvMF_1622: DvMF_1622 - flagellin domain protein (RefSeq), at 2,000,204 to 2,001,091
_1622
Position (kb)
1998
1999
2000 Strain fitness (log2 ratio)
-2
-1
0
1 at 1997.132 kb on - strand, within DvMF_1620 at 1997.137 kb on - strand, within DvMF_1620 at 1997.140 kb on + strand, within DvMF_1620 at 1997.287 kb on - strand, within DvMF_1620 at 1997.584 kb on + strand, within DvMF_1620 at 1997.644 kb on + strand, within DvMF_1620 at 1997.662 kb on - strand, within DvMF_1620 at 1997.752 kb on - strand, within DvMF_1620 at 1997.849 kb on + strand at 1998.024 kb on + strand at 1998.163 kb on - strand at 1998.220 kb on + strand at 1998.304 kb on + strand, within DvMF_1621 at 1998.312 kb on - strand, within DvMF_1621 at 1998.312 kb on - strand, within DvMF_1621 at 1998.423 kb on + strand, within DvMF_1621 at 1998.509 kb on + strand, within DvMF_1621 at 1998.528 kb on + strand, within DvMF_1621 at 1998.549 kb on + strand, within DvMF_1621 at 1998.556 kb on - strand, within DvMF_1621 at 1998.861 kb on + strand, within DvMF_1621 at 1999.163 kb on + strand, within DvMF_1621 at 1999.163 kb on + strand, within DvMF_1621 at 1999.342 kb on + strand, within DvMF_1621 at 1999.421 kb on + strand, within DvMF_1621 at 1999.441 kb on - strand, within DvMF_1621 at 1999.536 kb on + strand, within DvMF_1621 at 1999.606 kb on + strand, within DvMF_1621 at 1999.614 kb on - strand, within DvMF_1621 at 1999.614 kb on - strand, within DvMF_1621 at 1999.640 kb on - strand, within DvMF_1621 at 1999.645 kb on + strand, within DvMF_1621 at 1999.695 kb on + strand at 1999.703 kb on - strand at 1999.898 kb on - strand at 1999.905 kb on - strand at 2000.040 kb on + strand at 2000.083 kb on + strand at 2000.083 kb on + strand at 2000.196 kb on + strand at 2000.326 kb on + strand, within DvMF_1622 at 2000.429 kb on + strand, within DvMF_1622 at 2000.482 kb on - strand, within DvMF_1622 at 2000.633 kb on + strand, within DvMF_1622
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Chlorite 3.125 mM remove 1,997,132 - DvMF_1620 0.44 -0.6 1,997,137 - DvMF_1620 0.44 -0.7 1,997,140 + DvMF_1620 0.44 +0.8 1,997,287 - DvMF_1620 0.54 -0.5 1,997,584 + DvMF_1620 0.74 -0.3 1,997,644 + DvMF_1620 0.78 -0.2 1,997,662 - DvMF_1620 0.79 -0.0 1,997,752 - DvMF_1620 0.85 -0.2 1,997,849 + +0.5 1,998,024 + -0.7 1,998,163 - -0.6 1,998,220 + -0.5 1,998,304 + DvMF_1621 0.11 -0.5 1,998,312 - DvMF_1621 0.11 -0.3 1,998,312 - DvMF_1621 0.11 +0.4 1,998,423 + DvMF_1621 0.17 -0.3 1,998,509 + DvMF_1621 0.22 -0.2 1,998,528 + DvMF_1621 0.24 -0.7 1,998,549 + DvMF_1621 0.25 +0.4 1,998,556 - DvMF_1621 0.25 +0.0 1,998,861 + DvMF_1621 0.43 -0.3 1,999,163 + DvMF_1621 0.60 -0.1 1,999,163 + DvMF_1621 0.60 -0.7 1,999,342 + DvMF_1621 0.70 -1.9 1,999,421 + DvMF_1621 0.75 +0.0 1,999,441 - DvMF_1621 0.76 -0.7 1,999,536 + DvMF_1621 0.81 -0.5 1,999,606 + DvMF_1621 0.85 +0.2 1,999,614 - DvMF_1621 0.86 -0.3 1,999,614 - DvMF_1621 0.86 -0.7 1,999,640 - DvMF_1621 0.87 -0.7 1,999,645 + DvMF_1621 0.88 -0.1 1,999,695 + -0.3 1,999,703 - -0.6 1,999,898 - +0.4 1,999,905 - -0.1 2,000,040 + -0.4 2,000,083 + -0.9 2,000,083 + -0.4 2,000,196 + -0.2 2,000,326 + DvMF_1622 0.14 -0.3 2,000,429 + DvMF_1622 0.25 +0.5 2,000,482 - DvMF_1622 0.31 -1.0 2,000,633 + DvMF_1622 0.48 -0.4
Or see this region's nucleotide sequence