Experiment: MoLS4 with L-Valine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0745 and cysW are separated by 410 nucleotides cysW and cysA overlap by 4 nucleotides cysA and acs are separated by 85 nucleotides
DVU0745: DVU0745 - ABC transporter, periplasmic substrate-binding protein (TIGR), at 834,410 to 835,228
DVU0745
DVU0746: cysW - ABC transporter, permease protein (TIGR), at 835,639 to 836,385
cysW
DVU0747: cysA - ABC transporter, ATP-binding protein (TIGR), at 836,382 to 837,020
cysA
DVU0748: acs - acetyl-CoA synthetase (TIGR), at 837,106 to 839,052
acs
Position (kb) 835
836
837 Strain fitness (log2 ratio) -2
-1
0
1 at 834.791 kb on + strand, within DVU0745 at 834.857 kb on - strand, within DVU0745 at 834.928 kb on + strand, within DVU0745 at 835.041 kb on - strand, within DVU0745 at 835.097 kb on - strand, within DVU0745 at 835.116 kb on - strand, within DVU0745 at 835.207 kb on - strand at 835.207 kb on - strand at 835.232 kb on + strand at 835.266 kb on + strand at 835.359 kb on + strand at 835.438 kb on - strand at 835.684 kb on + strand at 835.720 kb on + strand, within cysW at 835.789 kb on - strand, within cysW at 835.819 kb on + strand, within cysW at 835.820 kb on - strand, within cysW at 835.890 kb on - strand, within cysW at 835.914 kb on + strand, within cysW at 836.006 kb on + strand, within cysW at 836.030 kb on + strand, within cysW at 836.143 kb on + strand, within cysW at 836.372 kb on + strand at 836.709 kb on + strand, within cysA at 836.751 kb on - strand, within cysA at 836.838 kb on + strand, within cysA at 836.843 kb on + strand, within cysA at 836.871 kb on + strand, within cysA at 836.953 kb on + strand, within cysA at 837.048 kb on - strand at 837.118 kb on - strand at 837.136 kb on - strand at 837.145 kb on + strand at 837.228 kb on - strand at 837.268 kb on - strand at 837.276 kb on + strand at 837.287 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Valine (N) remove 834,791 + DVU0745 0.47 -0.1 834,857 - DVU0745 0.55 +0.1 834,928 + DVU0745 0.63 +0.0 835,041 - DVU0745 0.77 -0.4 835,097 - DVU0745 0.84 +0.3 835,116 - DVU0745 0.86 +0.2 835,207 - -0.1 835,207 - -0.1 835,232 + -2.4 835,266 + +0.2 835,359 + -0.4 835,438 - -0.2 835,684 + -0.7 835,720 + cysW DVU0746 0.11 +0.2 835,789 - cysW DVU0746 0.20 +0.9 835,819 + cysW DVU0746 0.24 -0.4 835,820 - cysW DVU0746 0.24 +0.8 835,890 - cysW DVU0746 0.34 -0.0 835,914 + cysW DVU0746 0.37 +0.6 836,006 + cysW DVU0746 0.49 +0.2 836,030 + cysW DVU0746 0.52 +0.0 836,143 + cysW DVU0746 0.67 -0.4 836,372 + -0.3 836,709 + cysA DVU0747 0.51 +0.4 836,751 - cysA DVU0747 0.58 +0.7 836,838 + cysA DVU0747 0.71 +0.9 836,843 + cysA DVU0747 0.72 -0.0 836,871 + cysA DVU0747 0.77 +0.1 836,953 + cysA DVU0747 0.89 +0.7 837,048 - +1.3 837,118 - -0.8 837,136 - -0.9 837,145 + +0.2 837,228 - +0.1 837,268 - -1.5 837,276 + -1.6 837,287 + -0.0
Or see this region's nucleotide sequence