Strain Fitness in Pantoea sp. MT58 around IAI47_13025

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50
2,753,059	+		IAI47_13020	0.16	+0.4
2,753,059	+		IAI47_13020	0.16	+0.7
2,753,059	+		IAI47_13020	0.16	+1.0
2,753,060	-		IAI47_13020	0.16	+0.9
2,753,060	-		IAI47_13020	0.16	+1.8
2,753,060	-		IAI47_13020	0.16	+1.6
2,753,060	-		IAI47_13020	0.16	-1.6
2,753,148	-		IAI47_13020	0.24	+0.8
2,753,148	-		IAI47_13020	0.24	-1.5
2,753,213	+		IAI47_13020	0.30	+1.8
2,753,228	+		IAI47_13020	0.31	-1.0
2,753,228	+		IAI47_13020	0.31	-0.3
2,753,229	-		IAI47_13020	0.31	+0.5
2,753,287	-		IAI47_13020	0.36	+0.9
2,753,309	+		IAI47_13020	0.38	+0.6
2,753,309	+		IAI47_13020	0.38	+0.8
2,753,309	+		IAI47_13020	0.38	-0.3
2,753,309	+		IAI47_13020	0.38	-0.9
2,753,309	+		IAI47_13020	0.38	-0.9
2,753,310	-		IAI47_13020	0.38	+0.4
2,753,310	-		IAI47_13020	0.38	-0.5
2,753,310	-		IAI47_13020	0.38	-0.3
2,753,310	-		IAI47_13020	0.38	+0.4
2,753,310	-		IAI47_13020	0.38	-0.3
2,753,310	-		IAI47_13020	0.38	+0.3
2,753,310	-		IAI47_13020	0.38	+3.3
2,753,310	-		IAI47_13020	0.38	-1.8
2,753,310	-		IAI47_13020	0.38	+0.4
2,753,310	-		IAI47_13020	0.38	-0.4
2,753,310	-		IAI47_13020	0.38	-0.9
2,753,315	+		IAI47_13020	0.39	-0.5
2,753,353	+		IAI47_13020	0.42	+0.4
2,753,353	+		IAI47_13020	0.42	-0.8
2,753,354	-		IAI47_13020	0.42	+1.2
2,753,354	-		IAI47_13020	0.42	+0.5
2,753,354	-		IAI47_13020	0.42	-0.3
2,753,489	+		IAI47_13020	0.54	+0.0
2,753,490	-		IAI47_13020	0.54	-1.3
2,753,490	-		IAI47_13020	0.54	+0.8
2,753,504	+		IAI47_13020	0.55	-1.0
2,753,579	+		IAI47_13020	0.62	-1.0
2,753,580	-		IAI47_13020	0.62	-0.6
2,753,633	+		IAI47_13020	0.66	-0.8
2,753,633	+		IAI47_13020	0.66	+0.5
2,753,634	-		IAI47_13020	0.67	+1.6
2,753,663	+		IAI47_13020	0.69	+0.5
2,753,663	+		IAI47_13020	0.69	+0.3
2,753,664	-		IAI47_13020	0.69	-0.1
2,753,675	+		IAI47_13020	0.70	-0.8
2,753,676	-		IAI47_13020	0.70	-0.3
2,753,677	+		IAI47_13020	0.70	+1.1
2,753,677	+		IAI47_13020	0.70	-0.5
2,753,677	+		IAI47_13020	0.70	-0.7
2,753,677	+		IAI47_13020	0.70	-1.0
2,753,678	-		IAI47_13020	0.70	-1.0
2,753,678	-		IAI47_13020	0.70	-0.4
2,753,678	-		IAI47_13020	0.70	+0.4
2,753,702	+		IAI47_13020	0.73	-0.9
2,753,702	+		IAI47_13020	0.73	-0.1
2,753,703	-		IAI47_13020	0.73	+1.0
2,753,712	+		IAI47_13020	0.73	-1.4
2,753,713	-		IAI47_13020	0.74	+1.7
2,753,721	-		IAI47_13020	0.74	-1.1
2,753,747	-		IAI47_13020	0.76	+0.5
2,753,892	-		IAI47_13020	0.89	-1.2
2,753,910	+				-0.6
2,753,910	+				+0.2
2,753,911	-				-0.7
2,753,990	+				+0.6
2,753,991	-				+0.4
2,753,998	+				+0.0
2,753,998	+				-0.9
2,754,017	+				+1.7
2,754,017	+				-0.4
2,754,017	+				+2.0
2,754,018	-				+2.7
2,754,018	-				+0.5
2,754,018	-				+0.4
2,754,025	+				-1.2
2,754,054	+				-0.6
2,754,054	+				-0.3
2,754,054	+				-0.6
2,754,054	+				-1.0
2,754,055	-				+0.5
2,754,055	-				-1.7
2,754,055	-				+0.2
2,754,055	-				-0.3
2,754,142	+		IAI47_13025	0.18	+0.1
2,754,142	+		IAI47_13025	0.18	+0.7
2,754,142	+		IAI47_13025	0.18	-2.6
2,754,142	+		IAI47_13025	0.18	+0.3
2,754,142	+		IAI47_13025	0.18	-1.4
2,754,142	+		IAI47_13025	0.18	-2.0
2,754,143	-		IAI47_13025	0.19	-0.7
2,754,143	-		IAI47_13025	0.19	-1.8
2,754,143	-		IAI47_13025	0.19	+0.5
2,754,143	-		IAI47_13025	0.19	-0.6
2,754,143	-		IAI47_13025	0.19	-0.4
2,754,153	-		IAI47_13025	0.21	-0.4
2,754,163	+		IAI47_13025	0.23	+0.8
2,754,163	+		IAI47_13025	0.23	-0.6
2,754,163	+		IAI47_13025	0.23	+0.1
2,754,163	+		IAI47_13025	0.23	-0.2
2,754,163	+		IAI47_13025	0.23	-1.3
2,754,163	+		IAI47_13025	0.23	-1.4
2,754,164	-		IAI47_13025	0.23	+0.2
2,754,164	-		IAI47_13025	0.23	-2.2
2,754,164	-		IAI47_13025	0.23	-2.3
2,754,164	-		IAI47_13025	0.23	+0.3
2,754,195	+		IAI47_13025	0.30	+0.5
2,754,196	-		IAI47_13025	0.30	+1.4
2,754,196	-		IAI47_13025	0.30	+0.6
2,754,224	-		IAI47_13025	0.36	-2.2
2,754,225	+		IAI47_13025	0.36	-0.5
2,754,225	+		IAI47_13025	0.36	-0.8
2,754,225	+		IAI47_13025	0.36	+0.2
2,754,225	+		IAI47_13025	0.36	-0.6
2,754,225	+		IAI47_13025	0.36	+0.3
2,754,225	+		IAI47_13025	0.36	-0.9
2,754,225	+		IAI47_13025	0.36	-0.9
2,754,225	+		IAI47_13025	0.36	+0.7
2,754,225	+		IAI47_13025	0.36	-0.2
2,754,225	+		IAI47_13025	0.36	-2.0
2,754,226	+		IAI47_13025	0.36	-1.7
2,754,226	-		IAI47_13025	0.36	-0.3
2,754,226	-		IAI47_13025	0.36	-1.3
2,754,226	-		IAI47_13025	0.36	-1.7
2,754,226	-		IAI47_13025	0.36	-2.0
2,754,226	-		IAI47_13025	0.36	+0.9
2,754,226	-		IAI47_13025	0.36	-0.2
2,754,226	-		IAI47_13025	0.36	+0.9
2,754,226	-		IAI47_13025	0.36	-0.2
2,754,226	-		IAI47_13025	0.36	-0.8
2,754,226	-		IAI47_13025	0.36	-0.3
2,754,226	-		IAI47_13025	0.36	+1.8
2,754,226	-		IAI47_13025	0.36	-0.3
2,754,226	-		IAI47_13025	0.36	-0.8
2,754,226	-		IAI47_13025	0.36	+0.4
2,754,226	-		IAI47_13025	0.36	-0.3
2,754,226	-		IAI47_13025	0.36	-0.4
2,754,226	-		IAI47_13025	0.36	-0.5
2,754,255	+		IAI47_13025	0.43	-0.1
2,754,255	+		IAI47_13025	0.43	+0.7
2,754,256	-		IAI47_13025	0.43	+0.6
2,754,292	+		IAI47_13025	0.50	-2.2
2,754,399	+		IAI47_13025	0.73	-0.9
2,754,400	-		IAI47_13025	0.74	-1.2
2,754,400	-		IAI47_13025	0.74	+0.3
2,754,451	+		IAI47_13025	0.84	-1.2
2,754,451	+		IAI47_13025	0.84	+0.2
2,754,452	-		IAI47_13025	0.85	-1.8
2,754,452	-		IAI47_13025	0.85	-0.3
2,754,452	-		IAI47_13025	0.85	-0.7
2,754,496	+				+0.1
2,754,496	+				-0.3
2,754,496	+				-2.0
2,754,497	-				+0.1
2,754,523	+				-0.3
2,754,524	-				-0.0
2,754,524	-				-0.0
2,754,524	-				-1.0
2,754,524	-				+2.4
2,754,524	-				+0.0
2,754,560	+				+0.3
2,754,574	+				-0.7
2,754,574	+				-0.6
2,754,574	+				+0.3
2,754,574	+				-1.1
2,754,575	-				+0.3
2,754,575	-				+0.2
2,754,575	-				+0.3
2,754,575	-				+0.1
2,754,575	-				+0.1
2,754,576	+				+0.8
2,754,576	+				+0.2
2,754,576	+				-1.0
2,754,576	+				-0.6
2,754,577	-				+2.2
2,754,577	-				+0.9
2,754,577	-				+0.1
2,754,577	-				+2.2
2,754,577	-				+0.1
2,754,577	-				+1.8
2,754,577	-				-0.9
2,754,577	-				-0.1
2,754,577	-				-0.7
2,754,577	-				+1.7
2,754,577	-				-0.1
2,754,578	+				-1.0
2,754,578	+				+0.1
2,754,579	-				-0.8
2,754,579	-				+0.7
2,754,579	-				+0.0
2,754,579	-				-1.3
2,754,611	-				+0.2
2,754,611	-				-0.1
2,754,630	-				-0.1
2,754,656	-				+0.8
2,754,670	+				-0.6
2,754,743	+		IAI47_13030	0.17	+0.2
2,754,744	-		IAI47_13030	0.17	+0.7
2,754,744	-		IAI47_13030	0.17	-0.4
2,754,744	-		IAI47_13030	0.17	+0.0
2,754,744	-		IAI47_13030	0.17	+1.5
2,754,744	-		IAI47_13030	0.17	+1.2
2,754,829	+		IAI47_13030	0.27	-0.9
2,754,830	-		IAI47_13030	0.27	-1.0
2,754,881	-		IAI47_13030	0.33	-0.9
2,754,898	+		IAI47_13030	0.35	+0.8
2,754,898	+		IAI47_13030	0.35	+1.4
2,754,898	+		IAI47_13030	0.35	+1.0
2,754,898	+		IAI47_13030	0.35	-1.4
2,754,898	+		IAI47_13030	0.35	+0.7
2,754,898	+		IAI47_13030	0.35	+1.0
2,754,899	-		IAI47_13030	0.35	+0.5
2,754,899	-		IAI47_13030	0.35	-2.2
2,754,914	+		IAI47_13030	0.37	-0.9
2,754,914	+		IAI47_13030	0.37	-1.5
2,754,914	+		IAI47_13030	0.37	-0.4
2,754,967	+		IAI47_13030	0.43	+2.8
2,754,967	+		IAI47_13030	0.43	+0.4
2,754,968	-		IAI47_13030	0.44	+2.4
2,754,968	-		IAI47_13030	0.44	+0.4
2,754,968	-		IAI47_13030	0.44	+0.8
2,754,984	+		IAI47_13030	0.46	+0.9
2,754,985	-		IAI47_13030	0.46	-0.2
2,754,985	-		IAI47_13030	0.46	+1.1
2,754,985	-		IAI47_13030	0.46	+1.8
2,754,985	-		IAI47_13030	0.46	-1.6
2,755,178	-		IAI47_13030	0.68	-0.7
2,755,290	+		IAI47_13030	0.82	+1.5
2,755,291	-		IAI47_13030	0.82	-0.7
2,755,348	-		IAI47_13030	0.89	+0.1
2,755,348	-		IAI47_13030	0.89	-0.8
2,755,352	+		IAI47_13030	0.89	-0.6
2,755,352	+		IAI47_13030	0.89	-0.2
2,755,352	+		IAI47_13030	0.89	-0.7
2,755,374	+				+1.1
2,755,375	-				+0.1
2,755,375	-				-0.5
2,755,375	-				+0.1
2,755,402	+				+0.3
2,755,409	-				+0.0
2,755,409	-				+1.3
2,755,426	+				-1.4
2,755,426	+				-1.1
2,755,426	+				-0.6
2,755,427	-				-1.4
2,755,427	-				+0.3
2,755,427	-				-0.9
2,755,427	-				+0.2
2,755,438	+				+0.8
2,755,438	+				-0.4
2,755,439	-				-0.9
2,755,439	-				-0.3
2,755,439	-				-0.0
2,755,476	+				+0.0
2,755,476	+				+1.1
2,755,476	+				+0.6
2,755,477	-				-0.6
2,755,477	-				+0.0