Experiment: Cephalothin 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27385 and BWI76_RS27390 are separated by 65 nucleotides BWI76_RS27390 and BWI76_RS27395 are separated by 123 nucleotides BWI76_RS27395 and BWI76_RS27400 are separated by 73 nucleotides
BWI76_RS27385: BWI76_RS27385 - orotate phosphoribosyltransferase, at 5,682,399 to 5,683,040
_RS27385
BWI76_RS27390: BWI76_RS27390 - ribonuclease PH, at 5,683,106 to 5,683,822
_RS27390
BWI76_RS27395: BWI76_RS27395 - hypothetical protein, at 5,683,946 to 5,684,809
_RS27395
BWI76_RS27400: BWI76_RS27400 - chloride channel protein, at 5,684,883 to 5,686,142
_RS27400
Position (kb)
5683
5684
5685 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5683.011 kb on + strand at 5683.056 kb on - strand at 5683.142 kb on + strand at 5683.155 kb on + strand at 5683.194 kb on - strand, within BWI76_RS27390 at 5683.328 kb on + strand, within BWI76_RS27390 at 5683.468 kb on + strand, within BWI76_RS27390 at 5683.607 kb on + strand, within BWI76_RS27390 at 5683.652 kb on + strand, within BWI76_RS27390 at 5683.655 kb on - strand, within BWI76_RS27390 at 5683.719 kb on - strand, within BWI76_RS27390 at 5683.738 kb on + strand, within BWI76_RS27390 at 5683.772 kb on + strand at 5683.772 kb on + strand at 5683.780 kb on - strand at 5683.780 kb on - strand at 5683.798 kb on - strand at 5683.905 kb on + strand at 5683.913 kb on - strand at 5683.941 kb on + strand at 5683.941 kb on + strand at 5684.004 kb on - strand at 5684.106 kb on + strand, within BWI76_RS27395 at 5684.170 kb on + strand, within BWI76_RS27395 at 5684.178 kb on - strand, within BWI76_RS27395 at 5684.544 kb on + strand, within BWI76_RS27395 at 5684.565 kb on + strand, within BWI76_RS27395 at 5684.959 kb on - strand at 5684.964 kb on + strand at 5685.111 kb on - strand, within BWI76_RS27400 at 5685.446 kb on + strand, within BWI76_RS27400 at 5685.587 kb on - strand, within BWI76_RS27400 at 5685.619 kb on + strand, within BWI76_RS27400 at 5685.683 kb on + strand, within BWI76_RS27400 at 5685.773 kb on - strand, within BWI76_RS27400 at 5685.784 kb on - strand, within BWI76_RS27400 at 5685.797 kb on - strand, within BWI76_RS27400
Per-strain Table
Position Strand Gene LocusTag Fraction Cephalothin 0.16 mg/ml remove 5,683,011 + +1.3 5,683,056 - -0.6 5,683,142 + -1.0 5,683,155 + -2.6 5,683,194 - BWI76_RS27390 0.12 -1.9 5,683,328 + BWI76_RS27390 0.31 -1.6 5,683,468 + BWI76_RS27390 0.50 -2.2 5,683,607 + BWI76_RS27390 0.70 -2.5 5,683,652 + BWI76_RS27390 0.76 -0.7 5,683,655 - BWI76_RS27390 0.77 -0.9 5,683,719 - BWI76_RS27390 0.85 -0.9 5,683,738 + BWI76_RS27390 0.88 -1.2 5,683,772 + -3.0 5,683,772 + -1.8 5,683,780 - -2.1 5,683,780 - -1.3 5,683,798 - -1.8 5,683,905 + +0.9 5,683,913 - +0.3 5,683,941 + +0.7 5,683,941 + -1.5 5,684,004 - -1.7 5,684,106 + BWI76_RS27395 0.19 -0.8 5,684,170 + BWI76_RS27395 0.26 -1.7 5,684,178 - BWI76_RS27395 0.27 -1.9 5,684,544 + BWI76_RS27395 0.69 -1.3 5,684,565 + BWI76_RS27395 0.72 -1.7 5,684,959 - -0.1 5,684,964 + +0.2 5,685,111 - BWI76_RS27400 0.18 -0.1 5,685,446 + BWI76_RS27400 0.45 -1.0 5,685,587 - BWI76_RS27400 0.56 -0.2 5,685,619 + BWI76_RS27400 0.58 -0.4 5,685,683 + BWI76_RS27400 0.63 +0.3 5,685,773 - BWI76_RS27400 0.71 -0.1 5,685,784 - BWI76_RS27400 0.72 -0.1 5,685,797 - BWI76_RS27400 0.73 +1.3
Or see this region's nucleotide sequence