Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS25140

Experiment: Cephalothin 0.16 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntBWI76_RS25130 and BWI76_RS25135 overlap by 8 nucleotidesBWI76_RS25135 and BWI76_RS25140 are separated by 97 nucleotidesBWI76_RS25140 and BWI76_RS25145 are separated by 99 nucleotidesBWI76_RS25145 and BWI76_RS25150 overlap by 11 nucleotidesBWI76_RS25150 and BWI76_RS25155 overlap by 48 nucleotides BWI76_RS25130: BWI76_RS25130 - phosphoglucosamine mutase, at 5,230,110 to 5,231,447 _RS25130 BWI76_RS25135: BWI76_RS25135 - dihydropteroate synthase, at 5,231,440 to 5,232,288 _RS25135 BWI76_RS25140: BWI76_RS25140 - ATP-dependent metalloprotease, at 5,232,386 to 5,234,320 _RS25140 BWI76_RS25145: BWI76_RS25145 - 23S rRNA (uridine(2552)-2'-O)-methyltransferase, at 5,234,420 to 5,235,049 _RS25145 BWI76_RS25150: BWI76_RS25150 - hypothetical protein, at 5,235,039 to 5,235,221 _RS25150 BWI76_RS25155: BWI76_RS25155 - RNA-binding protein, at 5,235,174 to 5,235,467 _RS25155 Position (kb) 5232 5233 5234 5235Strain fitness (log2 ratio) -1 0 1at 5232.337 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Cephalothin 0.16 mg/ml
remove
5,232,337 - +0.6

Or see this region's nucleotide sequence