Experiment: Cephalothin 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22875 and BWI76_RS22880 are separated by 53 nucleotides BWI76_RS22880 and BWI76_RS22885 are separated by 149 nucleotides
BWI76_RS22875: BWI76_RS22875 - serine transporter, at 4,772,778 to 4,774,067
_RS22875
BWI76_RS22880: BWI76_RS22880 - L-serine ammonia-lyase, at 4,774,121 to 4,775,488
_RS22880
BWI76_RS22885: BWI76_RS22885 - aliphatic sulfonate ABC transporter substrate-binding protein, at 4,775,638 to 4,776,579
_RS22885
Position (kb)
4774
4775
4776 Strain fitness (log2 ratio)
-1
0
1
2 at 4773.154 kb on + strand, within BWI76_RS22875 at 4773.274 kb on + strand, within BWI76_RS22875 at 4773.371 kb on - strand, within BWI76_RS22875 at 4773.434 kb on + strand, within BWI76_RS22875 at 4773.515 kb on - strand, within BWI76_RS22875 at 4773.542 kb on + strand, within BWI76_RS22875 at 4773.624 kb on + strand, within BWI76_RS22875 at 4773.632 kb on - strand, within BWI76_RS22875 at 4773.886 kb on + strand, within BWI76_RS22875 at 4773.947 kb on + strand at 4774.100 kb on + strand at 4774.168 kb on + strand at 4774.223 kb on - strand at 4774.382 kb on - strand, within BWI76_RS22880 at 4774.501 kb on + strand, within BWI76_RS22880 at 4775.082 kb on + strand, within BWI76_RS22880 at 4775.252 kb on + strand, within BWI76_RS22880 at 4775.255 kb on - strand, within BWI76_RS22880 at 4775.356 kb on - strand at 4775.824 kb on - strand, within BWI76_RS22885 at 4775.934 kb on - strand, within BWI76_RS22885 at 4775.944 kb on - strand, within BWI76_RS22885 at 4776.081 kb on + strand, within BWI76_RS22885 at 4776.086 kb on + strand, within BWI76_RS22885 at 4776.117 kb on + strand, within BWI76_RS22885 at 4776.171 kb on + strand, within BWI76_RS22885 at 4776.249 kb on - strand, within BWI76_RS22885 at 4776.256 kb on - strand, within BWI76_RS22885 at 4776.266 kb on + strand, within BWI76_RS22885 at 4776.266 kb on - strand, within BWI76_RS22885 at 4776.266 kb on - strand, within BWI76_RS22885 at 4776.267 kb on - strand, within BWI76_RS22885 at 4776.459 kb on + strand, within BWI76_RS22885
Per-strain Table
Position Strand Gene LocusTag Fraction Cephalothin 0.16 mg/ml remove 4,773,154 + BWI76_RS22875 0.29 +1.1 4,773,274 + BWI76_RS22875 0.38 -1.0 4,773,371 - BWI76_RS22875 0.46 +0.9 4,773,434 + BWI76_RS22875 0.51 -0.5 4,773,515 - BWI76_RS22875 0.57 +0.1 4,773,542 + BWI76_RS22875 0.59 +0.0 4,773,624 + BWI76_RS22875 0.66 -0.2 4,773,632 - BWI76_RS22875 0.66 +0.3 4,773,886 + BWI76_RS22875 0.86 +1.8 4,773,947 + +0.3 4,774,100 + -0.1 4,774,168 + -0.6 4,774,223 - +0.8 4,774,382 - BWI76_RS22880 0.19 -0.7 4,774,501 + BWI76_RS22880 0.28 -0.3 4,775,082 + BWI76_RS22880 0.70 -0.8 4,775,252 + BWI76_RS22880 0.83 +0.4 4,775,255 - BWI76_RS22880 0.83 +0.5 4,775,356 - -0.1 4,775,824 - BWI76_RS22885 0.20 -0.8 4,775,934 - BWI76_RS22885 0.31 -0.0 4,775,944 - BWI76_RS22885 0.32 -0.2 4,776,081 + BWI76_RS22885 0.47 +0.7 4,776,086 + BWI76_RS22885 0.48 -0.0 4,776,117 + BWI76_RS22885 0.51 +0.2 4,776,171 + BWI76_RS22885 0.57 +0.2 4,776,249 - BWI76_RS22885 0.65 -0.0 4,776,256 - BWI76_RS22885 0.66 -0.6 4,776,266 + BWI76_RS22885 0.67 -0.4 4,776,266 - BWI76_RS22885 0.67 +0.5 4,776,266 - BWI76_RS22885 0.67 +0.4 4,776,267 - BWI76_RS22885 0.67 +0.3 4,776,459 + BWI76_RS22885 0.87 +0.5
Or see this region's nucleotide sequence