Experiment: Cephalothin 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21945 and BWI76_RS21950 are separated by 39 nucleotides BWI76_RS21950 and BWI76_RS21955 are separated by 35 nucleotides BWI76_RS21955 and BWI76_RS21960 are separated by 135 nucleotides
BWI76_RS21945: BWI76_RS21945 - LysR family transcriptional regulator, at 4,584,488 to 4,585,408
_RS21945
BWI76_RS21950: BWI76_RS21950 - prephenate dehydratase/arogenate dehydratase, at 4,585,448 to 4,586,221
_RS21950
BWI76_RS21955: BWI76_RS21955 - transferase, at 4,586,257 to 4,587,051
_RS21955
BWI76_RS21960: BWI76_RS21960 - fimbrial protein, at 4,587,187 to 4,588,281
_RS21960
Position (kb)
4585
4586
4587 Strain fitness (log2 ratio)
-1
0
1
2 at 4584.614 kb on + strand, within BWI76_RS21945 at 4584.730 kb on + strand at 4584.738 kb on - strand, within BWI76_RS21945 at 4585.201 kb on - strand, within BWI76_RS21945 at 4585.327 kb on + strand at 4585.575 kb on - strand, within BWI76_RS21950 at 4585.575 kb on - strand, within BWI76_RS21950 at 4585.613 kb on + strand, within BWI76_RS21950 at 4585.613 kb on + strand, within BWI76_RS21950 at 4585.655 kb on - strand, within BWI76_RS21950 at 4585.695 kb on + strand, within BWI76_RS21950 at 4585.703 kb on + strand, within BWI76_RS21950 at 4585.781 kb on - strand, within BWI76_RS21950 at 4585.927 kb on + strand, within BWI76_RS21950 at 4585.982 kb on - strand, within BWI76_RS21950 at 4586.011 kb on + strand, within BWI76_RS21950 at 4586.019 kb on - strand, within BWI76_RS21950 at 4586.019 kb on - strand, within BWI76_RS21950 at 4586.019 kb on - strand, within BWI76_RS21950 at 4586.056 kb on - strand, within BWI76_RS21950 at 4586.309 kb on - strand at 4586.419 kb on + strand, within BWI76_RS21955 at 4586.536 kb on + strand, within BWI76_RS21955 at 4586.537 kb on + strand, within BWI76_RS21955 at 4586.676 kb on + strand, within BWI76_RS21955 at 4586.727 kb on - strand, within BWI76_RS21955 at 4586.897 kb on + strand, within BWI76_RS21955 at 4586.911 kb on + strand, within BWI76_RS21955 at 4586.980 kb on - strand at 4587.031 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cephalothin 0.16 mg/ml remove 4,584,614 + BWI76_RS21945 0.14 +0.5 4,584,730 + +0.3 4,584,738 - BWI76_RS21945 0.27 +0.9 4,585,201 - BWI76_RS21945 0.77 -0.3 4,585,327 + +1.9 4,585,575 - BWI76_RS21950 0.16 -0.4 4,585,575 - BWI76_RS21950 0.16 -0.8 4,585,613 + BWI76_RS21950 0.21 +0.2 4,585,613 + BWI76_RS21950 0.21 +1.7 4,585,655 - BWI76_RS21950 0.27 -1.0 4,585,695 + BWI76_RS21950 0.32 -0.9 4,585,703 + BWI76_RS21950 0.33 -0.4 4,585,781 - BWI76_RS21950 0.43 -0.0 4,585,927 + BWI76_RS21950 0.62 -0.6 4,585,982 - BWI76_RS21950 0.69 -1.6 4,586,011 + BWI76_RS21950 0.73 +0.2 4,586,019 - BWI76_RS21950 0.74 +0.3 4,586,019 - BWI76_RS21950 0.74 -0.3 4,586,019 - BWI76_RS21950 0.74 -0.8 4,586,056 - BWI76_RS21950 0.79 -0.7 4,586,309 - +1.2 4,586,419 + BWI76_RS21955 0.20 -0.5 4,586,536 + BWI76_RS21955 0.35 +0.1 4,586,537 + BWI76_RS21955 0.35 +0.7 4,586,676 + BWI76_RS21955 0.53 +0.3 4,586,727 - BWI76_RS21955 0.59 -0.2 4,586,897 + BWI76_RS21955 0.81 -0.6 4,586,911 + BWI76_RS21955 0.82 -0.9 4,586,980 - -1.0 4,587,031 - -0.2
Or see this region's nucleotide sequence