Experiment: Cephalothin 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21530 and BWI76_RS21535 are separated by 164 nucleotides BWI76_RS21535 and BWI76_RS21540 are separated by 18 nucleotides
BWI76_RS21530: BWI76_RS21530 - signal recognition particle protein, at 4,507,675 to 4,509,042
_RS21530
BWI76_RS21535: BWI76_RS21535 - inner membrane protein YpjD, at 4,509,207 to 4,509,998
_RS21535
BWI76_RS21540: BWI76_RS21540 - membrane protein, at 4,510,017 to 4,511,306
_RS21540
Position (kb)
4509
4510 Strain fitness (log2 ratio)
-1
0
1
2 at 4509.113 kb on - strand at 4509.113 kb on - strand at 4509.145 kb on + strand at 4509.160 kb on + strand at 4509.160 kb on + strand at 4509.168 kb on - strand at 4509.168 kb on - strand at 4509.232 kb on - strand at 4509.500 kb on - strand, within BWI76_RS21535 at 4509.529 kb on + strand, within BWI76_RS21535 at 4509.615 kb on + strand, within BWI76_RS21535 at 4509.633 kb on - strand, within BWI76_RS21535 at 4509.754 kb on + strand, within BWI76_RS21535 at 4509.777 kb on - strand, within BWI76_RS21535 at 4509.777 kb on - strand, within BWI76_RS21535 at 4509.799 kb on - strand, within BWI76_RS21535 at 4509.930 kb on - strand at 4509.964 kb on - strand at 4510.036 kb on - strand at 4510.073 kb on - strand at 4510.229 kb on - strand, within BWI76_RS21540 at 4510.277 kb on + strand, within BWI76_RS21540 at 4510.602 kb on + strand, within BWI76_RS21540 at 4510.833 kb on - strand, within BWI76_RS21540 at 4510.961 kb on + strand, within BWI76_RS21540 at 4510.969 kb on - strand, within BWI76_RS21540
Per-strain Table
Position Strand Gene LocusTag Fraction Cephalothin 0.16 mg/ml remove 4,509,113 - -0.0 4,509,113 - +0.1 4,509,145 + +2.5 4,509,160 + +0.7 4,509,160 + +0.8 4,509,168 - +0.3 4,509,168 - -0.7 4,509,232 - +1.1 4,509,500 - BWI76_RS21535 0.37 +0.1 4,509,529 + BWI76_RS21535 0.41 +0.8 4,509,615 + BWI76_RS21535 0.52 +0.8 4,509,633 - BWI76_RS21535 0.54 +0.9 4,509,754 + BWI76_RS21535 0.69 +0.7 4,509,777 - BWI76_RS21535 0.72 +0.7 4,509,777 - BWI76_RS21535 0.72 +0.4 4,509,799 - BWI76_RS21535 0.75 +0.9 4,509,930 - +0.1 4,509,964 - +0.7 4,510,036 - +0.6 4,510,073 - -0.4 4,510,229 - BWI76_RS21540 0.16 -0.7 4,510,277 + BWI76_RS21540 0.20 +0.2 4,510,602 + BWI76_RS21540 0.45 +0.0 4,510,833 - BWI76_RS21540 0.63 +0.6 4,510,961 + BWI76_RS21540 0.73 +1.1 4,510,969 - BWI76_RS21540 0.74 +0.2
Or see this region's nucleotide sequence