Experiment: Cephalothin 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20470 and BWI76_RS20475 are separated by 62 nucleotides BWI76_RS20475 and BWI76_RS20480 are separated by 257 nucleotides
BWI76_RS20470: BWI76_RS20470 - long-chain fatty acid transporter, at 4,285,088 to 4,286,452
_RS20470
BWI76_RS20475: BWI76_RS20475 - phospholipid-binding lipoprotein MlaA, at 4,286,515 to 4,287,276
_RS20475
BWI76_RS20480: BWI76_RS20480 - formate/nitrite transporter, at 4,287,534 to 4,288,430
_RS20480
Position (kb) 4286
4287
4288 Strain fitness (log2 ratio) -1
0
1
2 at 4285.936 kb on - strand, within BWI76_RS20470 at 4285.936 kb on - strand, within BWI76_RS20470 at 4286.048 kb on + strand, within BWI76_RS20470 at 4286.057 kb on + strand, within BWI76_RS20470 at 4286.161 kb on - strand, within BWI76_RS20470 at 4286.189 kb on - strand, within BWI76_RS20470 at 4286.558 kb on + strand at 4286.807 kb on - strand, within BWI76_RS20475 at 4287.003 kb on + strand, within BWI76_RS20475 at 4287.101 kb on + strand, within BWI76_RS20475 at 4287.126 kb on - strand, within BWI76_RS20475 at 4287.163 kb on + strand, within BWI76_RS20475 at 4287.474 kb on + strand at 4287.557 kb on - strand at 4287.646 kb on - strand, within BWI76_RS20480 at 4287.713 kb on - strand, within BWI76_RS20480 at 4287.715 kb on - strand, within BWI76_RS20480 at 4287.853 kb on + strand, within BWI76_RS20480 at 4288.041 kb on - strand, within BWI76_RS20480 at 4288.213 kb on - strand, within BWI76_RS20480 at 4288.216 kb on + strand, within BWI76_RS20480 at 4288.254 kb on + strand, within BWI76_RS20480
Per-strain Table
Position Strand Gene LocusTag Fraction Cephalothin 0.16 mg/ml remove 4,285,936 - BWI76_RS20470 0.62 +1.2 4,285,936 - BWI76_RS20470 0.62 -0.2 4,286,048 + BWI76_RS20470 0.70 +0.2 4,286,057 + BWI76_RS20470 0.71 -0.9 4,286,161 - BWI76_RS20470 0.79 -1.4 4,286,189 - BWI76_RS20470 0.81 +0.3 4,286,558 + +1.4 4,286,807 - BWI76_RS20475 0.38 -0.2 4,287,003 + BWI76_RS20475 0.64 +0.6 4,287,101 + BWI76_RS20475 0.77 +1.9 4,287,126 - BWI76_RS20475 0.80 +1.4 4,287,163 + BWI76_RS20475 0.85 +1.0 4,287,474 + +0.6 4,287,557 - -0.4 4,287,646 - BWI76_RS20480 0.12 +0.2 4,287,713 - BWI76_RS20480 0.20 +0.2 4,287,715 - BWI76_RS20480 0.20 -0.1 4,287,853 + BWI76_RS20480 0.36 +0.3 4,288,041 - BWI76_RS20480 0.57 +0.5 4,288,213 - BWI76_RS20480 0.76 +0.2 4,288,216 + BWI76_RS20480 0.76 +0.3 4,288,254 + BWI76_RS20480 0.80 +0.2
Or see this region's nucleotide sequence