Experiment: Cephalothin 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19775 and BWI76_RS19780 are separated by 70 nucleotides BWI76_RS19780 and BWI76_RS19785 are separated by 9 nucleotides
BWI76_RS19775: BWI76_RS19775 - phage resistance protein, at 4,134,055 to 4,135,617
_RS19775
BWI76_RS19780: BWI76_RS19780 - antibiotic ABC transporter substrate-binding protein, at 4,135,688 to 4,137,493
_RS19780
BWI76_RS19785: BWI76_RS19785 - microcin C ABC transporter permease YejB, at 4,137,503 to 4,138,597
_RS19785
Position (kb) 4135
4136
4137
4138 Strain fitness (log2 ratio) -1
0
1
2
3 at 4134.911 kb on + strand, within BWI76_RS19775 at 4134.919 kb on - strand, within BWI76_RS19775 at 4135.463 kb on - strand at 4135.637 kb on + strand at 4135.704 kb on + strand at 4135.757 kb on - strand at 4135.811 kb on - strand at 4135.811 kb on - strand at 4135.859 kb on - strand at 4135.932 kb on + strand, within BWI76_RS19780 at 4135.954 kb on - strand, within BWI76_RS19780 at 4136.348 kb on + strand, within BWI76_RS19780 at 4136.474 kb on + strand, within BWI76_RS19780 at 4136.674 kb on - strand, within BWI76_RS19780 at 4136.725 kb on - strand, within BWI76_RS19780 at 4136.808 kb on - strand, within BWI76_RS19780 at 4136.853 kb on - strand, within BWI76_RS19780 at 4136.975 kb on + strand, within BWI76_RS19780 at 4136.990 kb on - strand, within BWI76_RS19780 at 4137.365 kb on + strand at 4137.522 kb on + strand at 4137.747 kb on + strand, within BWI76_RS19785 at 4137.922 kb on - strand, within BWI76_RS19785 at 4137.935 kb on + strand, within BWI76_RS19785 at 4138.357 kb on - strand, within BWI76_RS19785 at 4138.387 kb on - strand, within BWI76_RS19785 at 4138.422 kb on - strand, within BWI76_RS19785
Per-strain Table
Position Strand Gene LocusTag Fraction Cephalothin 0.16 mg/ml remove 4,134,911 + BWI76_RS19775 0.55 +3.2 4,134,919 - BWI76_RS19775 0.55 +0.5 4,135,463 - -0.6 4,135,637 + +0.1 4,135,704 + -0.4 4,135,757 - -0.4 4,135,811 - -0.5 4,135,811 - +0.8 4,135,859 - +0.6 4,135,932 + BWI76_RS19780 0.14 +1.0 4,135,954 - BWI76_RS19780 0.15 +0.9 4,136,348 + BWI76_RS19780 0.37 +0.1 4,136,474 + BWI76_RS19780 0.44 +0.5 4,136,674 - BWI76_RS19780 0.55 +0.7 4,136,725 - BWI76_RS19780 0.57 +1.1 4,136,808 - BWI76_RS19780 0.62 +0.4 4,136,853 - BWI76_RS19780 0.65 +0.4 4,136,975 + BWI76_RS19780 0.71 +1.1 4,136,990 - BWI76_RS19780 0.72 -0.9 4,137,365 + +0.2 4,137,522 + +0.5 4,137,747 + BWI76_RS19785 0.22 +0.2 4,137,922 - BWI76_RS19785 0.38 -0.2 4,137,935 + BWI76_RS19785 0.39 +0.3 4,138,357 - BWI76_RS19785 0.78 -1.1 4,138,387 - BWI76_RS19785 0.81 +0.7 4,138,422 - BWI76_RS19785 0.84 +0.2
Or see this region's nucleotide sequence