Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11700
Experiment: Cephalothin 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cephalothin 0.16 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,461,161 | + | -0.1 | |||
2,461,161 | - | -0.1 | |||
2,461,182 | + | +0.2 | |||
2,461,195 | + | +0.4 | |||
2,461,195 | - | +0.3 | |||
2,461,252 | + | -0.3 | |||
2,461,257 | + | +0.2 | |||
2,461,265 | + | +0.3 | |||
2,461,270 | + | +0.1 | |||
2,461,273 | - | -0.1 | |||
2,461,281 | + | -0.3 | |||
2,461,286 | + | BWI76_RS11695 | 0.10 | -2.8 | |
2,461,294 | - | BWI76_RS11695 | 0.12 | -1.6 | |
2,461,294 | - | BWI76_RS11695 | 0.12 | +0.8 | |
2,461,316 | + | BWI76_RS11695 | 0.16 | -0.1 | |
2,461,324 | - | BWI76_RS11695 | 0.18 | -0.1 | |
2,461,386 | + | BWI76_RS11695 | 0.31 | -0.1 | |
2,461,394 | - | BWI76_RS11695 | 0.33 | -0.9 | |
2,461,479 | - | BWI76_RS11695 | 0.50 | +0.3 | |
2,461,480 | - | BWI76_RS11695 | 0.50 | -0.3 | |
2,461,535 | - | BWI76_RS11695 | 0.62 | -0.1 | |
2,461,554 | + | BWI76_RS11695 | 0.66 | +0.1 | |
2,461,579 | + | BWI76_RS11695 | 0.71 | -0.4 | |
2,461,714 | + | -0.1 | |||
2,461,714 | + | -1.1 | |||
2,461,731 | + | +0.5 | |||
2,461,777 | - | -0.6 | |||
2,461,777 | - | +0.3 | |||
2,461,777 | - | +1.4 | |||
2,461,777 | - | -1.1 | |||
2,461,857 | - | -0.0 | |||
2,461,869 | - | +0.6 | |||
2,462,037 | + | BWI76_RS11700 | 0.20 | -1.6 | |
2,462,426 | + | +0.5 | |||
2,462,634 | + | +0.1 | |||
2,462,979 | + | BWI76_RS11705 | 0.25 | -0.1 |
Or see this region's nucleotide sequence