Experiment: Cephalothin 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS01915 and BWI76_RS01920 are separated by 145 nucleotides BWI76_RS01920 and BWI76_RS01925 are separated by 214 nucleotides
BWI76_RS01915: BWI76_RS01915 - replicative DNA helicase, at 389,441 to 390,856
_RS01915
BWI76_RS01920: BWI76_RS01920 - alanine racemase, at 391,002 to 392,081
_RS01920
BWI76_RS01925: BWI76_RS01925 - aromatic amino acid aminotransferase, at 392,296 to 393,489
_RS01925
Position (kb) 391
392
393 Strain fitness (log2 ratio) -1
0
1 at 390.894 kb on + strand at 390.897 kb on - strand at 391.119 kb on - strand, within BWI76_RS01920 at 391.131 kb on - strand, within BWI76_RS01920 at 391.148 kb on + strand, within BWI76_RS01920 at 391.156 kb on - strand, within BWI76_RS01920 at 391.188 kb on + strand, within BWI76_RS01920 at 391.301 kb on - strand, within BWI76_RS01920 at 391.301 kb on - strand, within BWI76_RS01920 at 391.417 kb on + strand, within BWI76_RS01920 at 391.429 kb on + strand, within BWI76_RS01920 at 391.439 kb on + strand, within BWI76_RS01920 at 391.439 kb on + strand, within BWI76_RS01920 at 391.447 kb on - strand, within BWI76_RS01920 at 391.555 kb on + strand, within BWI76_RS01920 at 391.590 kb on + strand, within BWI76_RS01920 at 391.830 kb on + strand, within BWI76_RS01920 at 392.257 kb on - strand at 392.267 kb on - strand at 392.508 kb on + strand, within BWI76_RS01925 at 392.563 kb on - strand, within BWI76_RS01925 at 392.596 kb on - strand, within BWI76_RS01925 at 392.840 kb on + strand, within BWI76_RS01925 at 392.860 kb on + strand, within BWI76_RS01925 at 392.988 kb on - strand, within BWI76_RS01925
Per-strain Table
Position Strand Gene LocusTag Fraction Cephalothin 0.16 mg/ml remove 390,894 + +0.5 390,897 - -1.2 391,119 - BWI76_RS01920 0.11 -0.6 391,131 - BWI76_RS01920 0.12 -0.7 391,148 + BWI76_RS01920 0.14 +0.1 391,156 - BWI76_RS01920 0.14 +0.5 391,188 + BWI76_RS01920 0.17 -0.2 391,301 - BWI76_RS01920 0.28 -0.9 391,301 - BWI76_RS01920 0.28 -0.0 391,417 + BWI76_RS01920 0.38 -0.1 391,429 + BWI76_RS01920 0.40 +1.0 391,439 + BWI76_RS01920 0.40 +0.0 391,439 + BWI76_RS01920 0.40 +0.0 391,447 - BWI76_RS01920 0.41 +0.1 391,555 + BWI76_RS01920 0.51 -0.2 391,590 + BWI76_RS01920 0.54 -1.1 391,830 + BWI76_RS01920 0.77 +0.5 392,257 - +0.2 392,267 - +1.4 392,508 + BWI76_RS01925 0.18 -0.9 392,563 - BWI76_RS01925 0.22 -0.2 392,596 - BWI76_RS01925 0.25 -1.7 392,840 + BWI76_RS01925 0.46 -0.2 392,860 + BWI76_RS01925 0.47 -0.4 392,988 - BWI76_RS01925 0.58 +0.1
Or see this region's nucleotide sequence