Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0815

Experiment: MoLS4 with Chlorite 6.25 mM

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntDvMF_0813 and DvMF_0814 are separated by 320 nucleotidesDvMF_0814 and DvMF_0815 are separated by 3 nucleotidesDvMF_0815 and DvMF_0816 are separated by 30 nucleotides DvMF_0813: DvMF_0813 - single-strand binding protein (RefSeq), at 981,218 to 981,760 _0813 DvMF_0814: DvMF_0814 - hypothetical protein (RefSeq), at 982,081 to 982,455 _0814 DvMF_0815: DvMF_0815 - hypothetical protein (RefSeq), at 982,459 to 983,109 _0815 DvMF_0816: DvMF_0816 - Acetyl-CoA carboxylase (RefSeq), at 983,140 to 985,404 _0816 Position (kb) 982 983 984Strain fitness (log2 ratio) -1 0 1at 981.827 kb on - strandat 981.875 kb on + strandat 981.899 kb on - strandat 982.084 kb on - strandat 982.456 kb on + strandat 982.462 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction MoLS4 with Chlorite 6.25 mM
remove
981,827 - -0.9
981,875 + -0.7
981,899 - -0.3
982,084 - +0.0
982,456 + -0.0
982,462 + -1.2

Or see this region's nucleotide sequence