Experiment: MoLS4 with Chlorite 6.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0142 and DvMF_0143 are separated by 402 nucleotides DvMF_0143 and DvMF_0144 are separated by 72 nucleotides DvMF_0144 and DvMF_0145 are separated by 125 nucleotides
DvMF_0142: DvMF_0142 - anaerobic cobalt chelatase (RefSeq), at 158,638 to 159,510
_0142
DvMF_0143: DvMF_0143 - putative lipoprotein (RefSeq), at 159,913 to 160,863
_0143
DvMF_0144: DvMF_0144 - twin-arginine translocation protein, TatA/E family subunit (RefSeq), at 160,936 to 161,139
_0144
DvMF_0145: DvMF_0145 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq), at 161,265 to 163,133
_0145
Position (kb) 159
160
161 Strain fitness (log2 ratio) -2
-1
0
1 at 159.491 kb on + strand at 160.028 kb on - strand, within DvMF_0143 at 160.146 kb on - strand, within DvMF_0143 at 160.146 kb on - strand, within DvMF_0143 at 160.227 kb on + strand, within DvMF_0143 at 160.463 kb on + strand, within DvMF_0143 at 160.494 kb on - strand, within DvMF_0143 at 160.558 kb on + strand, within DvMF_0143 at 160.599 kb on + strand, within DvMF_0143 at 161.231 kb on - strand at 161.633 kb on - strand, within DvMF_0145 at 161.709 kb on + strand, within DvMF_0145
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Chlorite 6.25 mM remove 159,491 + -0.2 160,028 - DvMF_0143 0.12 -1.2 160,146 - DvMF_0143 0.25 -1.0 160,146 - DvMF_0143 0.25 -2.1 160,227 + DvMF_0143 0.33 -1.8 160,463 + DvMF_0143 0.58 -1.4 160,494 - DvMF_0143 0.61 -1.1 160,558 + DvMF_0143 0.68 -1.5 160,599 + DvMF_0143 0.72 -1.8 161,231 - -0.4 161,633 - DvMF_0145 0.20 -0.6 161,709 + DvMF_0145 0.24 -0.1
Or see this region's nucleotide sequence