Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c28040

Experiment: D-Mannose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannose (C)
2,923,473	+		PGA1_c28020	0.68	-2.4
2,923,481	-		PGA1_c28020	0.69	-2.0
2,923,514	-		PGA1_c28020	0.72	-2.9
2,923,516	-		PGA1_c28020	0.73	-2.1
2,923,537	+		PGA1_c28020	0.75	-1.9
2,923,545	-		PGA1_c28020	0.76	-2.5
2,923,636	+		PGA1_c28020	0.85	-2.9
2,923,654	+		PGA1_c28020	0.87	-1.3
2,923,693	-				-1.7
2,923,772	-				-3.3
2,923,772	-				-3.0
2,923,772	-				-2.4
2,923,826	-				-0.7
2,923,848	-		PGA1_c28030	0.11	+0.0
2,923,848	-		PGA1_c28030	0.11	+0.1
2,923,954	-		PGA1_c28030	0.27	-0.1
2,924,055	-		PGA1_c28030	0.43	+0.5
2,924,109	-		PGA1_c28030	0.51	-1.2
2,924,125	+		PGA1_c28030	0.54	-0.2
2,924,177	-		PGA1_c28030	0.62	-1.2
2,924,181	+		PGA1_c28030	0.62	-0.4
2,924,233	-		PGA1_c28030	0.70	-0.0
2,924,233	-		PGA1_c28030	0.70	-0.8
2,924,259	+		PGA1_c28030	0.74	-1.1
2,924,355	+		PGA1_c28030	0.89	-1.5
2,924,429	+				-0.8
2,924,438	+				-0.6
2,924,449	+				-0.8
2,924,457	-				-1.2
2,924,494	+				+0.6
2,924,553	+		PGA1_c28040	0.17	-0.7
2,924,576	-		PGA1_c28040	0.20	-1.4
2,924,582	+		PGA1_c28040	0.21	-1.1
2,924,637	+		PGA1_c28040	0.28	-1.5
2,924,643	-		PGA1_c28040	0.29	-1.1
2,924,655	-		PGA1_c28040	0.30	-1.2
2,924,673	-		PGA1_c28040	0.33	-1.7
2,924,722	-		PGA1_c28040	0.39	-2.0
2,924,722	-		PGA1_c28040	0.39	-0.8
2,924,727	+		PGA1_c28040	0.40	-0.8
2,924,729	-		PGA1_c28040	0.40	-0.9
2,924,729	-		PGA1_c28040	0.40	-1.2
2,924,735	-		PGA1_c28040	0.41	+0.2
2,924,749	+		PGA1_c28040	0.42	-0.7
2,924,750	-		PGA1_c28040	0.42	-0.9
2,924,815	-		PGA1_c28040	0.51	-1.6
2,924,871	+		PGA1_c28040	0.58	+0.2
2,924,871	+		PGA1_c28040	0.58	-0.0
2,924,879	-		PGA1_c28040	0.59	-0.2
2,924,879	-		PGA1_c28040	0.59	-0.6
2,924,879	-		PGA1_c28040	0.59	-1.4
2,924,935	-		PGA1_c28040	0.66	+0.7
2,924,957	-		PGA1_c28040	0.69	-2.3
2,925,000	-		PGA1_c28040	0.75	-0.1
2,925,004	+		PGA1_c28040	0.75	-1.8
2,925,009	+		PGA1_c28040	0.76	-1.0
2,925,012	-		PGA1_c28040	0.76	-0.4
2,925,016	+		PGA1_c28040	0.77	-2.3
2,925,017	-		PGA1_c28040	0.77	-1.0
2,925,104	-		PGA1_c28040	0.88	-1.3
2,925,110	+		PGA1_c28040	0.89	-2.0
2,925,146	+				-2.8
2,925,158	-				+0.2
2,925,159	+				+0.2
2,925,163	+				-1.8
2,925,199	+				-0.9
2,925,300	+				+0.1
2,925,300	+				-1.6
2,925,308	-		PGA1_c28050	0.11	-0.2
2,925,308	-		PGA1_c28050	0.11	-0.3
2,925,308	-		PGA1_c28050	0.11	+0.8
2,925,308	-		PGA1_c28050	0.11	+0.8
2,925,348	+		PGA1_c28050	0.14	-0.2
2,925,413	-		PGA1_c28050	0.20	+0.2
2,925,423	+		PGA1_c28050	0.21	-1.0
2,925,423	+		PGA1_c28050	0.21	-0.6
2,925,423	+		PGA1_c28050	0.21	-2.0
2,925,423	+		PGA1_c28050	0.21	+0.9
2,925,423	+		PGA1_c28050	0.21	-0.2
2,925,423	+		PGA1_c28050	0.21	-0.8
2,925,423	+		PGA1_c28050	0.21	+0.2
2,925,423	+		PGA1_c28050	0.21	-0.5
2,925,423	+		PGA1_c28050	0.21	+1.7
2,925,423	+		PGA1_c28050	0.21	-0.5
2,925,423	+		PGA1_c28050	0.21	-0.0
2,925,423	+		PGA1_c28050	0.21	+1.0
2,925,423	+		PGA1_c28050	0.21	+0.5
2,925,423	+		PGA1_c28050	0.21	+0.2
2,925,423	+		PGA1_c28050	0.21	-0.2
2,925,423	+		PGA1_c28050	0.21	-0.4
2,925,423	+		PGA1_c28050	0.21	-2.8
2,925,431	-		PGA1_c28050	0.22	+0.1
2,925,431	-		PGA1_c28050	0.22	+0.1
2,925,431	-		PGA1_c28050	0.22	+0.5
2,925,431	-		PGA1_c28050	0.22	+0.2
2,925,431	-		PGA1_c28050	0.22	+0.9
2,925,431	-		PGA1_c28050	0.22	+0.3
2,925,431	-		PGA1_c28050	0.22	+1.0
2,925,431	-		PGA1_c28050	0.22	-1.2
2,925,431	-		PGA1_c28050	0.22	-0.6
2,925,431	-		PGA1_c28050	0.22	-0.3
2,925,431	-		PGA1_c28050	0.22	+1.5
2,925,431	-		PGA1_c28050	0.22	-0.6
2,925,431	-		PGA1_c28050	0.22	+0.7
2,925,431	-		PGA1_c28050	0.22	-0.2
2,925,431	-		PGA1_c28050	0.22	-0.6
2,925,431	-		PGA1_c28050	0.22	-0.1
2,925,431	-		PGA1_c28050	0.22	-0.3
2,925,431	-		PGA1_c28050	0.22	+0.1
2,925,431	-		PGA1_c28050	0.22	+0.2
2,925,431	-		PGA1_c28050	0.22	-0.9
2,925,431	-		PGA1_c28050	0.22	-0.3
2,925,431	-		PGA1_c28050	0.22	-0.2
2,925,431	-		PGA1_c28050	0.22	-0.4
2,925,441	-		PGA1_c28050	0.23	-0.2
2,925,446	-		PGA1_c28050	0.24	+0.3
2,925,451	-		PGA1_c28050	0.24	-2.2
2,925,479	+		PGA1_c28050	0.27	+0.4
2,925,496	-		PGA1_c28050	0.28	-0.2
2,925,516	+		PGA1_c28050	0.30	+0.5
2,925,529	-		PGA1_c28050	0.31	-0.1
2,925,529	-		PGA1_c28050	0.31	-1.5
2,925,535	-		PGA1_c28050	0.32	-0.5
2,925,535	-		PGA1_c28050	0.32	+0.7
2,925,537	-		PGA1_c28050	0.32	-0.6
2,925,588	+		PGA1_c28050	0.37	-2.7
2,925,594	-		PGA1_c28050	0.37	+0.2
2,925,594	-		PGA1_c28050	0.37	+0.9
2,925,655	+		PGA1_c28050	0.43	-1.9
2,925,668	-		PGA1_c28050	0.44	-0.5
2,925,810	-		PGA1_c28050	0.58	-0.0
2,925,868	+		PGA1_c28050	0.63	-0.5
2,925,911	-		PGA1_c28050	0.67	-2.4
2,925,933	+		PGA1_c28050	0.69	-3.2
2,925,933	+		PGA1_c28050	0.69	-2.3
2,925,933	+		PGA1_c28050	0.69	-1.6
2,925,933	+		PGA1_c28050	0.69	-0.7
2,925,936	-		PGA1_c28050	0.70	-0.3
2,925,941	-		PGA1_c28050	0.70	-3.0
2,925,941	-		PGA1_c28050	0.70	-0.7
2,925,941	-		PGA1_c28050	0.70	-1.0
2,925,941	-		PGA1_c28050	0.70	-1.9
2,925,941	-		PGA1_c28050	0.70	-1.5
2,925,948	-		PGA1_c28050	0.71	+0.7
2,925,948	-		PGA1_c28050	0.71	-1.1
2,925,948	-		PGA1_c28050	0.71	-0.4
2,925,985	+		PGA1_c28050	0.74	-1.0
2,926,000	-		PGA1_c28050	0.76	-0.6
2,926,049	-		PGA1_c28050	0.80	-2.2
2,926,061	-		PGA1_c28050	0.81	-1.9
2,926,078	+		PGA1_c28050	0.83	-0.7
2,926,086	-		PGA1_c28050	0.84	-3.4
2,926,089	+		PGA1_c28050	0.84	-1.5
2,926,089	+		PGA1_c28050	0.84	-1.7
2,926,089	+		PGA1_c28050	0.84	-1.3